Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DEFB117-201ENST00000602356 141 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC008739.3-201ENST00000603262 127 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MIR8058-201ENST00000615737 89 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 snoU18.1-201ENST00000629629 71 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC021753.1-201ENST00000635724 168 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCHD1Q96NR3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCHD1Q96NR3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 SNORD9-201ENST00000362566 104 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 U3.9-201ENST00000363823 204 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 Y_RNA.262-201ENST00000364641 102 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 Y_RNA.304-201ENST00000365011 112 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 RNU6-211P-201ENST00000384047 107 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 MIR186-201ENST00000384988 86 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC027124.2-201ENST00000428249 105 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC106707.2-201ENST00000484182 374 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC145146.1-201ENST00000496370 254 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 RNU6-107P-201ENST00000516643 102 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC026403.1-201ENST00000518938 295 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC025281.1-201ENST00000567026 265 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 MIR4308-201ENST00000580634 81 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC006380.1-201ENST00000603598 186 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 SNORA51-201ENST00000606420 132 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC005562.2-201ENST00000618264 111 ntBASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD1Q96NR3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 Y_RNA.435-201ENST00000384095 112 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 MIR670-201ENST00000390142 98 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AC004866.1-201ENST00000411748 78 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 OOSP1P1-201ENST00000423265 274 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 ARF4P2-201ENST00000430209 526 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AC004386.2-201ENST00000441858 148 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RNU6-344P-201ENST00000516635 111 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 MIR92B-201ENST00000607575 96 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AL365265.1-201ENST00000621045 234 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 AC009093.8-201ENST00000641769 292 ntBASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD1Q96NR3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 Y_RNA.170-201ENST00000363746 110 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 RPS29P4-201ENST00000414733 161 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 AC091021.1-201ENST00000468051 388 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 RNU2-12P-201ENST00000517216 168 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 MRPS18CP4-201ENST00000535821 231 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 SNORD11B-201ENST00000607707 90 ntBASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCHD1Q96NR3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 SNORD87-201ENST00000364849 89 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms