Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.708-201ENST00000516950 96 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 RNA5SP54-201ENST00000516951 92 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.2□□□□□ -2.06
CMTM3Q96MX0 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AL158827.2-201ENST00000602494 330 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 SNRPGP20-201ENST00000604477 205 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
CMTM3Q96MX0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.2□□□□□ -2.06
CMTM3Q96MX0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AL691447.3-201ENST00000635020 330 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 MTND4P12-201ENST00000498999 1377 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 SNORA9-201ENST00000384215 133 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.473-201ENST00000384333 102 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 SNORA41-201ENST00000384675 132 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 MIR491-201ENST00000384877 84 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 MIR9-1-201ENST00000385198 89 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 MIR153-2-201ENST00000385225 87 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AL356432.1-201ENST00000405809 419 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AC004386.2-201ENST00000441858 148 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 RNU7-175P-201ENST00000515915 61 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.670-201ENST00000516255 105 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AL590705.4-201ENST00000532209 134 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 AL442067.2-201ENST00000614033 363 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.19□□□□□ -2.06
CMTM3Q96MX0 U4.3-201ENST00000621047 82 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.2-201ENST00000362330 96 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 SNORA72.1-201ENST00000363485 129 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 MIR487A-201ENST00000385009 80 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 MIR320B2-201ENST00000408479 138 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 BX510359.4-201ENST00000423750 193 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC016925.1-201ENST00000458303 298 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 RPL30P10-201ENST00000488148 337 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC074050.1-201ENST00000563247 211 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 MIR5006-201ENST00000583027 110 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC005730.3-201ENST00000583067 366 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 UBE2V2P2-201ENST00000587677 504 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC093732.2-201ENST00000607950 274 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 AC009229.3-201ENST00000608056 282 ntBASIC2.18□□□□□ -2.06
CMTM3Q96MX0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.48-201ENST00000362710 103 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNU6-137P-201ENST00000363680 108 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNA5SP387-201ENST00000364226 106 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNU6-17P-201ENST00000384245 107 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNU6-18P-201ENST00000384527 107 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNU6-160P-201ENST00000384591 107 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 MIR549A-201ENST00000385268 96 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 SNORA12.2-201ENST00000391040 156 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 SNORA11.1-201ENST00000408133 129 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 MIR1283-2-201ENST00000408621 87 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 SNRPEP8-201ENST00000442866 260 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 MTCO3P8-201ENST00000453691 755 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.635-201ENST00000459041 101 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 RNU6-58P-201ENST00000517143 103 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 CBX3P8-201ENST00000532412 525 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AC104581.2-201ENST00000572227 430 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AP001094.1-201ENST00000579805 193 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 PISRT1.1-201ENST00000616930 107 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AL162373.1-201ENST00000620433 407 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AC098657.3-201ENST00000620434 263 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AL359697.1-201ENST00000624879 587 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 AC008555.8-201ENST00000623602 2168 ntBASIC2.17□□□□□ -2.06
CMTM3Q96MX0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
CMTM3Q96MX0 ZNF204P-201ENST00000416749 2397 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 LINC02555-201ENST00000563933 1951 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.303-201ENST00000364998 94 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms