Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC079140.3-201ENST00000511111 550 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 RNA5SP481-201ENST00000516814 122 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC019176.1-201ENST00000518519 225 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 DEFB131C-201ENST00000528817 165 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AP003461.1-201ENST00000528866 78 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 ELOCP32-201ENST00000548625 324 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 CYP3A52P-201ENST00000563326 91 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 SNORA59B-202ENST00000578183 701 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 MIR3923-201ENST00000579521 83 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL590229.1-201ENST00000603497 542 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 Z98751.3-201ENST00000604447 521 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AP001596.2-201ENST00000608410 312 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL021879.1-201ENST00000611756 288 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC083806.3-201ENST00000614016 455 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC022418.1-201ENST00000624118 445 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC009033.1-201ENST00000624279 431 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL603839.4-201ENST00000624658 1005 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL159152.1-201ENST00000635019 2587 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 MTND4P14-201ENST00000435799 1354 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LRRC28Q86X40 SNORD33-201ENST00000362761 85 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 MIR518E-201ENST00000385252 88 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 SNORA16.2-201ENST00000390991 127 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 RNU2-8P-201ENST00000410727 190 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 RNU6-1245P-201ENST00000411130 106 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 ARL5AP1-201ENST00000418991 388 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.71□□□□□ -2.3
LRRC28Q86X40 AL596276.1-201ENST00000434465 418 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AC007395.1-201ENST00000451333 677 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.71□□□□□ -2.3
LRRC28Q86X40 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AC005178.1-201ENST00000508392 440 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 RNU2-69P-201ENST00000516061 100 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 SNORD116-28-201ENST00000516123 91 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 SCARNA16.2-201ENST00000516520 172 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 RNU6-1178P-201ENST00000516674 107 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 Vault.3-201ENST00000516676 95 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 RNU6-410P-201ENST00000517006 107 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AP001893.2-201ENST00000526949 202 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AL512310.8-201ENST00000550183 120 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 HSPE1P4-201ENST00000550617 308 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AC245884.10-201ENST00000597355 337 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 MIR8065-201ENST00000620577 100 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 AC245060.5-201ENST00000610778 3293 ntBASIC0.71□□□□□ -2.3
LRRC28Q86X40 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNU1-124P-201ENST00000363861 145 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNU6-108P-201ENST00000365558 107 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNU6-968P-201ENST00000384076 107 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 SNORA36A-201ENST00000384221 132 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNU6-1127P-201ENST00000384580 107 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 Y_RNA.598-201ENST00000410480 95 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RPS3AP3-201ENST00000411933 242 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC060773.1-201ENST00000421698 310 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 UBE2D3P4-201ENST00000441973 436 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AL133217.1-201ENST00000450980 425 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNA5SP269-201ENST00000459032 137 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 MTCO3P7-201ENST00000510008 774 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC067942.3-201ENST00000512025 362 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.7□□□□□ -2.3
LRRC28Q86X40 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 SCARNA1-201ENST00000517138 166 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC021231.3-201ENST00000558497 370 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 HMGB1P33-201ENST00000563485 527 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 CYP4A27P-201ENST00000567218 190 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 MTATP6P3-201ENST00000581686 676 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.7□□□□□ -2.3
LRRC28Q86X40 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AP001836.1-201ENST00000604675 523 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RPL17P51-201ENST00000605218 238 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.7□□□□□ -2.3
LRRC28Q86X40 MTND4P4-201ENST00000439033 1366 ntBASIC0.7□□□□□ -2.3
LRRC28Q86X40 RNU6-552P-201ENST00000362869 119 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNY1P12-201ENST00000364251 105 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU6-534P-201ENST00000364877 106 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU6-438P-201ENST00000365561 103 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU6-925P-201ENST00000384629 104 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU6-584P-201ENST00000410350 95 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU4-46P-201ENST00000410818 138 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 Z99497.1-201ENST00000421282 135 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC079781.2-201ENST00000446424 169 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 SNRPFP3-201ENST00000457792 225 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.69□□□□□ -2.3
LRRC28Q86X40 RPL31P3-201ENST00000458430 332 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms