Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX6-1P78426 AL445305.1-201ENST00000432577 575 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX6-1P78426 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX6-1P78426 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AC103975.1-201ENST00000482506 483 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX6-1P78426 AC113195.1-201ENST00000579952 141 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 MIR3117-201ENST00000584034 78 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX6-1P78426 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AC005562.2-201ENST00000618264 111 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX6-1P78426 MIR148B-201ENST00000362252 99 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 RNU1-72P-201ENST00000362976 153 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 SNORA5B-201ENST00000363786 132 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AL357075.1-201ENST00000404107 726 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 MIR1294-201ENST00000408503 142 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 MIR1252-201ENST00000408861 65 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX6-1P78426 AC027124.2-201ENST00000428249 105 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 CBX3P6-201ENST00000430257 527 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX6-1P78426 AL161788.1-201ENST00000441805 169 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX6-1P78426 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX6-1P78426 AC107934.2-201ENST00000518653 310 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AL355297.3-201ENST00000604082 446 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 AC010999.1-201ENST00000611856 324 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 TCL6_2.1-201ENST00000615162 119 ntBASIC2.87□□□□□ -1.95
NKX6-1P78426 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX6-1P78426 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX6-1P78426 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX6-1P78426 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX6-1P78426 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX6-1P78426 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NKX6-1P78426 RNA5SP213-201ENST00000391031 106 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 SNORD78.2-201ENST00000391076 69 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 SNORA12-201ENST00000391162 147 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX6-1P78426 DPH3P2-201ENST00000422618 250 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 CENPBD1P1-201ENST00000464061 469 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AC021205.2-201ENST00000480069 347 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AC083906.5-201ENST00000503722 328 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.86□□□□□ -1.95
NKX6-1P78426 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX6-1P78426 RN7SKP49-201ENST00000516675 260 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 Y_RNA.715-201ENST00000517082 110 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 CYCSP23-201ENST00000519781 313 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AC245166.1-201ENST00000521012 253 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX6-1P78426 AC073657.2-201ENST00000605661 303 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AL162730.1-201ENST00000605734 292 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AL121655.1-201ENST00000605811 308 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 AL078596.1-201ENST00000624856 447 ntBASIC2.86□□□□□ -1.95
NKX6-1P78426 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
NKX6-1P78426 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
NKX6-1P78426 SNORD56.3-201ENST00000363507 71 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 Y_RNA.179-201ENST00000363844 90 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX6-1P78426 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX6-1P78426 SNORA18.3-201ENST00000384122 132 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 Y_RNA.471-201ENST00000384312 102 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 RNU6-1274P-201ENST00000384557 107 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 Y_RNA.595-201ENST00000410403 105 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX6-1P78426 SDAD1P3-201ENST00000427380 333 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 AC025750.2-201ENST00000442609 450 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX6-1P78426 U8.20-201ENST00000459445 131 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 RN7SL429P-201ENST00000479090 223 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 RN7SL489P-201ENST00000486185 223 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 RN7SL327P-201ENST00000488659 223 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 Y_RNA.713-201ENST00000517013 96 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX6-1P78426 MIR5006-201ENST00000583027 110 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 RN7SL853P-201ENST00000617250 223 ntBASIC2.85□□□□□ -1.95
NKX6-1P78426 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX6-1P78426 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX6-1P78426 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX6-1P78426 AC008264.2-201ENST00000610193 3731 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU1-70P-201ENST00000362618 164 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 SNORD32B-201ENST00000364460 84 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-26P-201ENST00000383985 107 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-708P-201ENST00000384217 107 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-793P-201ENST00000384233 104 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-301P-201ENST00000384277 107 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 MIR549A-201ENST00000385268 96 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU6-220P-201ENST00000390919 107 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms