Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNA5SP196-201ENST00000625967 102 ntBASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 AL133412.1-201ENST00000380194 2992 ntBASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB11Q9Y5F2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 AL159152.1-201ENST00000635019 2587 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 SNORA63.4-201ENST00000362763 126 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 RNU6-597P-201ENST00000365620 102 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 MIR554-201ENST00000384874 96 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 HSPE1P26-201ENST00000405341 275 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 MIR1911-201ENST00000410783 80 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 AC112771.1-201ENST00000463581 102 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 RNA5SP76-201ENST00000516277 87 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 MIR4286-201ENST00000580651 93 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 AC010680.1-201ENST00000590024 3590 ntBASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB11Q9Y5F2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 MIR518C-201ENST00000384822 101 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 YME1L1P1-201ENST00000429435 297 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 HMGN2P9-201ENST00000476875 229 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AC023632.4-201ENST00000517783 191 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AC079598.5-201ENST00000547460 117 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AP003357.1-201ENST00000604497 148 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 AL138880.2-201ENST00000616214 239 ntBASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB11Q9Y5F2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 SNORD45.3-201ENST00000363836 72 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 SNORA51.4-201ENST00000364993 124 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 RNU6-1144P-201ENST00000384247 104 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 Y_RNA.525-201ENST00000384570 113 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 MIR1278-201ENST00000408753 81 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 RPL23AP52-201ENST00000439311 478 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 CYCTP-201ENST00000504253 315 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 FCF1P8-201ENST00000510322 597 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 RNU6-1337P-201ENST00000516525 95 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 AC127455.1-201ENST00000565496 145 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 AC023043.3-201ENST00000593113 385 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB11Q9Y5F2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 SNORD32B-201ENST00000364460 84 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AL355796.1-201ENST00000406706 323 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AL121890.1-201ENST00000435457 205 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 ABCF2P2-201ENST00000450549 296 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 RN7SL604P-201ENST00000492589 296 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AL592156.1-201ENST00000508758 304 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 MIR4429-201ENST00000580105 73 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AC120024.3-201ENST00000603167 156 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 MIR6129-201ENST00000616087 109 ntBASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHB11Q9Y5F2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHB11Q9Y5F2 RNU6-1082P-201ENST00000364574 107 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP513-201ENST00000364648 118 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-1323P-201ENST00000384025 107 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 SNORD116-13-201ENST00000384408 92 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 SNORD66.1-201ENST00000391230 76 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AL139095.1-201ENST00000404326 391 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP239-201ENST00000410218 129 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.622-201ENST00000411091 108 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AL158823.1-201ENST00000418441 478 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms