Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008269.2-201ENST00000561915 1105 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC113195.1-201ENST00000579952 141 ntBASIC2.57□□□□□ -2
PKP4Q99569 VN1R107P-201ENST00000601784 209 ntBASIC2.57□□□□□ -2
PKP4Q99569 AL158827.2-201ENST00000602494 330 ntBASIC2.57□□□□□ -2
PKP4Q99569 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
PKP4Q99569 SNORD58B-201ENST00000607313 66 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC087588.2-201ENST00000617667 426 ntBASIC2.57□□□□□ -2
PKP4Q99569 AL691447.3-201ENST00000635020 330 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC091812.1-201ENST00000432235 1948 ntBASIC2.57□□□□□ -2
PKP4Q99569 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PKP4Q99569 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PKP4Q99569 MTND5P9-201ENST00000503854 1755 ntBASIC2.56□□□□□ -2
PKP4Q99569 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKP4Q99569 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKP4Q99569 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
PKP4Q99569 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PKP4Q99569 RNU6-227P-201ENST00000362865 103 ntBASIC2.56□□□□□ -2
PKP4Q99569 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
PKP4Q99569 RNU6-595P-201ENST00000363944 107 ntBASIC2.56□□□□□ -2
PKP4Q99569 Y_RNA.424-201ENST00000384063 103 ntBASIC2.56□□□□□ -2
PKP4Q99569 MIR518D-201ENST00000385014 87 ntBASIC2.56□□□□□ -2
PKP4Q99569 RNU6-101P-201ENST00000410323 104 ntBASIC2.56□□□□□ -2
PKP4Q99569 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
PKP4Q99569 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 MTND3P9-201ENST00000429526 346 ntBASIC2.56□□□□□ -2
PKP4Q99569 AC124916.1-201ENST00000444020 547 ntBASIC2.56□□□□□ -2
PKP4Q99569 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKP4Q99569 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 RNA5SP112-201ENST00000515937 99 ntBASIC2.56□□□□□ -2
PKP4Q99569 SNORA43.2-201ENST00000516652 128 ntBASIC2.56□□□□□ -2
PKP4Q99569 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 HSBP1P1-201ENST00000555205 166 ntBASIC2.56□□□□□ -2
PKP4Q99569 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
PKP4Q99569 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
PKP4Q99569 MIR4765-201ENST00000585007 77 ntBASIC2.56□□□□□ -2
PKP4Q99569 AC069294.1-201ENST00000608397 350 ntBASIC2.56□□□□□ -2
PKP4Q99569 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.56□□□□□ -2
PKP4Q99569 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
PKP4Q99569 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.56□□□□□ -2
PKP4Q99569 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
PKP4Q99569 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
PKP4Q99569 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PKP4Q99569 SNORA5B-201ENST00000363786 132 ntBASIC2.55□□□□□ -2
PKP4Q99569 RNU6-898P-201ENST00000365627 104 ntBASIC2.55□□□□□ -2
PKP4Q99569 Y_RNA.485-201ENST00000384395 102 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR568-201ENST00000385036 95 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR625-201ENST00000385047 85 ntBASIC2.55□□□□□ -2
PKP4Q99569 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
PKP4Q99569 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
PKP4Q99569 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
PKP4Q99569 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
PKP4Q99569 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
PKP4Q99569 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
PKP4Q99569 RPL22P13-201ENST00000493291 347 ntBASIC2.55□□□□□ -2
PKP4Q99569 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
PKP4Q99569 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
PKP4Q99569 AC022616.4-201ENST00000522985 181 ntBASIC2.55□□□□□ -2
PKP4Q99569 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.55□□□□□ -2
PKP4Q99569 AC004584.2-201ENST00000570407 410 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR5701-3-201ENST00000578890 82 ntBASIC2.55□□□□□ -2
PKP4Q99569 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR4503-201ENST00000582187 83 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR5701-1-201ENST00000585138 82 ntBASIC2.55□□□□□ -2
PKP4Q99569 AC016727.2-201ENST00000603988 621 ntBASIC2.55□□□□□ -2
PKP4Q99569 PRR13P7-201ENST00000605538 430 ntBASIC2.55□□□□□ -2
PKP4Q99569 AC009318.2-201ENST00000610917 651 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR5701-2-201ENST00000615634 82 ntBASIC2.55□□□□□ -2
PKP4Q99569 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.55□□□□□ -2
PKP4Q99569 AC024581.2-201ENST00000619986 252 ntBASIC2.55□□□□□ -2
PKP4Q99569 MIR4272-201ENST00000635924 64 ntBASIC2.55□□□□□ -2
PKP4Q99569 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.54□□□□□ -2
PKP4Q99569 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.54□□□□□ -2
PKP4Q99569 Y_RNA.47-201ENST00000362697 108 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
PKP4Q99569 SNORD50.1-201ENST00000362987 71 ntBASIC2.54□□□□□ -2
PKP4Q99569 Y_RNA.153-201ENST00000363615 91 ntBASIC2.54□□□□□ -2
PKP4Q99569 Y_RNA.176-201ENST00000363815 109 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-105P-201ENST00000363909 104 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
PKP4Q99569 SNORD14.1-201ENST00000365609 90 ntBASIC2.54□□□□□ -2
PKP4Q99569 Y_RNA.380-201ENST00000365663 111 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-574P-201ENST00000384265 107 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-784P-201ENST00000384330 106 ntBASIC2.54□□□□□ -2
PKP4Q99569 Y_RNA.510-201ENST00000384511 114 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-823P-201ENST00000391042 103 ntBASIC2.54□□□□□ -2
PKP4Q99569 RNU6-700P-201ENST00000391043 107 ntBASIC2.54□□□□□ -2
PKP4Q99569 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PKP4Q99569 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
PKP4Q99569 DPH3P2-201ENST00000422618 250 ntBASIC2.54□□□□□ -2
PKP4Q99569 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.54□□□□□ -2
PKP4Q99569 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.54□□□□□ -2
PKP4Q99569 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
PKP4Q99569 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
PKP4Q99569 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.54□□□□□ -2
PKP4Q99569 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.54□□□□□ -2
PKP4Q99569 SNORA40.14-201ENST00000516543 86 ntBASIC2.54□□□□□ -2
PKP4Q99569 AC144568.1-201ENST00000520139 137 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 284.6 ms