Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC022080.3-201ENST00000544433 482 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 MIR4801-201ENST00000582704 82 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC016727.2-201ENST00000603988 621 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CMTM3Q96MX0 RNA5SP374-201ENST00000362939 125 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 SNORD115-32-201ENST00000364079 82 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 SNORA18.2-201ENST00000383865 132 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.482-201ENST00000384377 111 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 NCOR1P3-201ENST00000420479 303 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AC027124.2-201ENST00000428249 105 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.23□□□□□ -2.05
CMTM3Q96MX0 RNA5SP341-201ENST00000516261 117 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AC026470.2-201ENST00000561492 181 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AC010928.2-201ENST00000588017 287 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AC011494.1-201ENST00000596454 237 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 MIR8057-201ENST00000620957 69 ntBASIC2.23□□□□□ -2.05
CMTM3Q96MX0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
CMTM3Q96MX0 AL365361.1-201ENST00000566942 3481 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 U8.10-201ENST00000384260 133 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RNU6-601P-201ENST00000384540 107 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.533-201ENST00000384596 114 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RNU6-1050P-201ENST00000410388 107 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC243428.1-201ENST00000421099 264 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 Z82188.1-201ENST00000436709 154 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 snoU13.30-201ENST00000458951 104 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RNU7-14P-201ENST00000459331 62 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 TOMM22P6-201ENST00000465035 409 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 ATP5EP1-201ENST00000510257 156 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC107222.1-201ENST00000510899 637 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RNU2-44P-201ENST00000516795 194 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RNU2-19P-201ENST00000517288 84 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 SNORD53-201ENST00000579969 78 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 BNIP3P22-201ENST00000593399 556 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 7SK.7-201ENST00000603504 247 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC025754.2-201ENST00000606491 432 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 RMST_6.1-201ENST00000611980 203 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AL355073.2-201ENST00000612106 557 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 AC005562.2-201ENST00000618264 111 ntBASIC2.22□□□□□ -2.05
CMTM3Q96MX0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CMTM3Q96MX0 ZNF299P-201ENST00000406845 1804 ntBASIC2.21□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.88-201ENST00000363029 99 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 SNORD115-3-201ENST00000363100 82 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 SNORD31B-201ENST00000364977 69 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 RNU6-438P-201ENST00000365561 103 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 MIR32-201ENST00000384965 70 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL138827.1-201ENST00000402666 306 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 U3.40-201ENST00000408706 208 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.594-201ENST00000410373 140 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 DEFB131C-201ENST00000528817 165 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AC087441.2-201ENST00000529141 262 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 MIR4325-201ENST00000583049 90 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 AC099654.5-201ENST00000636479 350 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 TPTEP1-208ENST00000636884 213 ntBASIC2.21□□□□□ -2.06
CMTM3Q96MX0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CMTM3Q96MX0 KPNA2P1-201ENST00000458289 1591 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 BX322639.1-202ENST00000423987 2213 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 SNORD115-8-201ENST00000363856 82 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 RNU6-595P-201ENST00000363944 107 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 SNORD115-38-201ENST00000365037 82 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 Y_RNA.490-201ENST00000384413 102 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 RN7SKP210-201ENST00000459176 261 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
CMTM3Q96MX0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms