Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 USP9YP12-201ENST00000450481 570 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC015911.1-201ENST00000495111 156 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC079140.2-201ENST00000506193 142 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 RNU6-1098P-201ENST00000516772 96 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 CENPUP1-201ENST00000526649 1202 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 ZNF321P-202ENST00000550843 495 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 MTCO3P23-201ENST00000561363 289 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 MIR3937-201ENST00000580135 106 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 MIR4775-201ENST00000581168 75 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC078795.3-201ENST00000602913 472 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL022161.1-201ENST00000604390 213 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC069114.2-201ENST00000604699 304 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC064872.1-201ENST00000604823 1072 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC009994.1-201ENST00000606889 253 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL353149.1-201ENST00000610667 244 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC005520.5-201ENST00000613926 164 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 SNORA43.4-201ENST00000629559 138 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL391516.1-201ENST00000554380 2449 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC100821.1-201ENST00000523153 2479 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
LRRC28Q86X40 RNU6-862P-201ENST00000362804 105 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 RNU6-116P-201ENST00000384042 109 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 RPL21P1-201ENST00000399532 476 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 MTND3P17-201ENST00000416968 344 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 ATP5J2P3-201ENST00000451550 258 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AL162395.1-201ENST00000457882 422 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 snoU13.30-201ENST00000458951 104 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC103851.1-201ENST00000506833 274 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 LRRC34P2-201ENST00000514850 553 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 FABP5P5-201ENST00000515537 406 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 RNU6-377P-201ENST00000515965 102 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 SNORA25.17-201ENST00000517184 124 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC109479.2-201ENST00000517842 174 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 SUMO2P18-201ENST00000518873 252 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC109446.2-201ENST00000567872 497 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC28Q86X40 MIR4742-201ENST00000581069 85 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AL356157.2-201ENST00000605122 111 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC211469.2-201ENST00000605461 205 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC005014.3-201ENST00000605985 190 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 AC099654.5-201ENST00000636479 350 ntBASIC0.74□□□□□ -2.29
LRRC28Q86X40 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LRRC28Q86X40 RNU6-1214P-201ENST00000363650 109 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 RNU6-1019P-201ENST00000364424 107 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 RNU6-378P-201ENST00000384324 107 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 MTATP6P19-201ENST00000413797 659 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AL593851.1-201ENST00000426171 157 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 HSFY7P-201ENST00000432672 318 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 HSFY8P-201ENST00000437934 318 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
LRRC28Q86X40 ZNF114P1-201ENST00000453500 292 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 HSFY5P-201ENST00000453726 309 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 SNORD11.1-201ENST00000459482 85 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC091874.1-201ENST00000511402 339 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 RNU6-856P-201ENST00000516959 98 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 MTND2P32-201ENST00000521584 1038 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 EIF4A1P12-201ENST00000551910 141 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC109446.1-201ENST00000566172 220 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.73□□□□□ -2.29
LRRC28Q86X40 AL391646.1-201ENST00000603860 190 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 MIR3976-201ENST00000606807 139 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC004223.4-201ENST00000612426 332 ntBASIC0.73□□□□□ -2.29
LRRC28Q86X40 AC092268.1-201ENST00000342691 405 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 Y_RNA.116-201ENST00000363292 103 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 U3.9-201ENST00000363823 204 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 MIR454-201ENST00000390180 115 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 MRPL35P1-201ENST00000404272 572 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 FTH1P12-201ENST00000432137 551 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC009961.2-201ENST00000435771 251 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC073614.1-201ENST00000438690 650 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 GAPDHP17-201ENST00000449858 1001 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC28Q86X40 HMGN1P13-201ENST00000505795 138 ntBASIC0.72□□□□□ -2.29
LRRC28Q86X40 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms