Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX6-1P78426 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX6-1P78426 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX6-1P78426 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NKX6-1P78426 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX6-1P78426 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX6-1P78426 BX322639.1-202ENST00000423987 2213 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX6-1P78426 MIR30E-201ENST00000362104 92 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 Y_RNA.27-201ENST00000362540 103 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 Y_RNA.152-201ENST00000363578 100 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RNU4-50P-201ENST00000364361 141 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 Y_RNA.380-201ENST00000365663 111 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RNU6-245P-201ENST00000384020 107 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 SNORA51.11-201ENST00000384442 131 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RNU6-823P-201ENST00000391042 103 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RN7SKP220-201ENST00000410611 288 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 AC113618.1-201ENST00000416747 285 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX6-1P78426 EIF1P2-201ENST00000428233 350 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX6-1P78426 CYP2C59P-201ENST00000457790 269 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 RN7SL283P-201ENST00000489055 303 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 SNORA64.4-201ENST00000516632 81 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 MIR5695-201ENST00000579717 85 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.91□□□□□ -1.94
NKX6-1P78426 ZNF204P-201ENST00000416749 2397 ntBASIC2.91□□□□□ -1.94
NKX6-1P78426 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NKX6-1P78426 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.91□□□□□ -1.94
NKX6-1P78426 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.9□□□□□ -1.94
NKX6-1P78426 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
NKX6-1P78426 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
NKX6-1P78426 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NKX6-1P78426 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 RNA5SP197-201ENST00000363357 119 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 RNA5SP240-201ENST00000365355 128 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 SNORA63.7-201ENST00000365579 123 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 MIR487A-201ENST00000385009 80 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 MIR10B-201ENST00000385011 110 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX6-1P78426 AC096638.1-201ENST00000444678 216 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 MTND5P22-201ENST00000458380 195 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 U8.22-201ENST00000459141 133 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.9□□□□□ -1.95
NKX6-1P78426 SNORA25.14-201ENST00000516481 132 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AP002770.2-201ENST00000543613 532 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 UBL5P4-201ENST00000562584 236 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AC090517.1-201ENST00000569307 266 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 MIR4506-201ENST00000584693 77 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AL390123.1-201ENST00000603216 237 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AL713866.2-201ENST00000603579 219 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AC136443.5-201ENST00000603741 370 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 RPL17P51-201ENST00000605218 238 ntBASIC2.9□□□□□ -1.95
NKX6-1P78426 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX6-1P78426 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX6-1P78426 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX6-1P78426 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX6-1P78426 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX6-1P78426 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX6-1P78426 SNORA80A-201ENST00000363922 136 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 RNY3P4-201ENST00000384428 101 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 FO393413.1-201ENST00000402892 195 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 RNU4-47P-201ENST00000410876 114 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX6-1P78426 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX6-1P78426 AC112220.1-201ENST00000434628 355 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC009969.1-201ENST00000438726 172 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 Z75741.1-201ENST00000446793 314 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 HMGN1P18-201ENST00000457642 277 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 RPL23AP67-201ENST00000465341 474 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX6-1P78426 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX6-1P78426 RNA5SP385-201ENST00000515947 110 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC022080.3-201ENST00000544433 482 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC093023.1-201ENST00000547375 507 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX6-1P78426 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AC018692.3-201ENST00000623929 123 ntBASIC2.89□□□□□ -1.95
NKX6-1P78426 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX6-1P78426 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NKX6-1P78426 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX6-1P78426 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX6-1P78426 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU6-1301P-201ENST00000362724 104 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU1-76P-201ENST00000362903 159 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU6-873P-201ENST00000363833 107 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU6-450P-201ENST00000364654 107 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 Y_RNA.551-201ENST00000384661 102 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 MIR627-201ENST00000384979 97 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 Y_RNA.597-201ENST00000410463 100 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
NKX6-1P78426 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms