Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.6□□□□□ -1.99
PKP4Q99569 MIR6134-201ENST00000617606 109 ntBASIC2.6□□□□□ -1.99
PKP4Q99569 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.6□□□□□ -1.99
PKP4Q99569 U4.7-201ENST00000638126 106 ntBASIC2.6□□□□□ -1.99
PKP4Q99569 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKP4Q99569 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
PKP4Q99569 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
PKP4Q99569 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PKP4Q99569 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-428P-201ENST00000362942 107 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-99P-201ENST00000364721 107 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 Y_RNA.314-201ENST00000365114 102 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 Y_RNA.455-201ENST00000384230 98 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-196P-201ENST00000384315 107 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 MIR9-1-201ENST00000385198 89 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PKP4Q99569 MIR548F4-201ENST00000408515 105 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-1156P-201ENST00000410365 100 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 Y_RNA.605-201ENST00000410577 105 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 EIF4EP2-201ENST00000422816 654 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.59□□□□□ -1.99
PKP4Q99569 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU4-77P-201ENST00000516692 156 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 RNU6-612P-201ENST00000516909 102 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 LINC00933-203ENST00000559812 219 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP4Q99569 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AC104695.3-201ENST00000604052 296 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AL132822.1-201ENST00000617063 513 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
PKP4Q99569 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PKP4Q99569 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
PKP4Q99569 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.58□□□□□ -2
PKP4Q99569 AL359854.1-201ENST00000614203 1594 ntBASIC2.58□□□□□ -2
PKP4Q99569 RNU6-78P-201ENST00000362897 107 ntBASIC2.58□□□□□ -2
PKP4Q99569 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
PKP4Q99569 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
PKP4Q99569 Y_RNA.533-201ENST00000384596 114 ntBASIC2.58□□□□□ -2
PKP4Q99569 Y_RNA.645-201ENST00000391229 102 ntBASIC2.58□□□□□ -2
PKP4Q99569 RPS29P13-201ENST00000402041 169 ntBASIC2.58□□□□□ -2
PKP4Q99569 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
PKP4Q99569 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.58□□□□□ -2
PKP4Q99569 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
PKP4Q99569 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.58□□□□□ -2
PKP4Q99569 AC006026.2-201ENST00000457376 180 ntBASIC2.58□□□□□ -2
PKP4Q99569 AP001486.1-201ENST00000463339 476 ntBASIC2.58□□□□□ -2
PKP4Q99569 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.58□□□□□ -2
PKP4Q99569 AC105758.1-201ENST00000506038 399 ntBASIC2.58□□□□□ -2
PKP4Q99569 MTCO2P24-201ENST00000515611 426 ntBASIC2.58□□□□□ -2
PKP4Q99569 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
PKP4Q99569 MIR5696-201ENST00000578474 85 ntBASIC2.58□□□□□ -2
PKP4Q99569 MIR3671-201ENST00000580455 88 ntBASIC2.58□□□□□ -2
PKP4Q99569 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
PKP4Q99569 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.58□□□□□ -2
PKP4Q99569 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
PKP4Q99569 AL138825.1-201ENST00000618587 192 ntBASIC2.58□□□□□ -2
PKP4Q99569 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.58□□□□□ -2
PKP4Q99569 ZNF299P-201ENST00000406845 1804 ntBASIC2.58□□□□□ -2
PKP4Q99569 AL109809.4-201ENST00000603520 2185 ntBASIC2.57□□□□□ -2
PKP4Q99569 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
PKP4Q99569 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
PKP4Q99569 Y_RNA.149-201ENST00000363558 117 ntBASIC2.57□□□□□ -2
PKP4Q99569 RNU6-336P-201ENST00000364891 107 ntBASIC2.57□□□□□ -2
PKP4Q99569 Y_RNA.389-201ENST00000383924 113 ntBASIC2.57□□□□□ -2
PKP4Q99569 Y_RNA.557-201ENST00000384680 107 ntBASIC2.57□□□□□ -2
PKP4Q99569 MIR147B-201ENST00000390185 80 ntBASIC2.57□□□□□ -2
PKP4Q99569 U6atac.2-201ENST00000408644 118 ntBASIC2.57□□□□□ -2
PKP4Q99569 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC096644.2-201ENST00000429278 159 ntBASIC2.57□□□□□ -2
PKP4Q99569 MTCYBP9-201ENST00000431021 303 ntBASIC2.57□□□□□ -2
PKP4Q99569 IPO7P1-201ENST00000442031 636 ntBASIC2.57□□□□□ -2
PKP4Q99569 AL353752.1-201ENST00000454946 260 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC112492.4-201ENST00000456549 352 ntBASIC2.57□□□□□ -2
PKP4Q99569 AL441985.1-201ENST00000457727 251 ntBASIC2.57□□□□□ -2
PKP4Q99569 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
PKP4Q99569 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
PKP4Q99569 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
PKP4Q99569 SNORA59A-201ENST00000459326 152 ntBASIC2.57□□□□□ -2
PKP4Q99569 MTATP8P1-201ENST00000467115 207 ntBASIC2.57□□□□□ -2
PKP4Q99569 RPS27AP9-201ENST00000477681 438 ntBASIC2.57□□□□□ -2
PKP4Q99569 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.57□□□□□ -2
PKP4Q99569 RNU7-4P-201ENST00000516961 62 ntBASIC2.57□□□□□ -2
PKP4Q99569 RNU1-104P-201ENST00000517280 175 ntBASIC2.57□□□□□ -2
PKP4Q99569 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.57□□□□□ -2
PKP4Q99569 AP004607.1-201ENST00000524456 203 ntBASIC2.57□□□□□ -2
PKP4Q99569 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms