Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC027807.2-201ENST00000616099 408 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 MTND5P17-201ENST00000418405 1603 ntBASIC0.78□□□□□ -2.29
LRRC28Q86X40 AC027514.1-201ENST00000588561 1603 ntBASIC0.78□□□□□ -2.29
LRRC28Q86X40 ICE2P2-201ENST00000483823 2787 ntBASIC0.78□□□□□ -2.29
LRRC28Q86X40 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LRRC28Q86X40 RNU6-527P-201ENST00000363425 104 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 Y_RNA.367-201ENST00000365544 101 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 RPL21P111-201ENST00000418453 477 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC010975.2-201ENST00000427781 588 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 SNRPEP8-201ENST00000442866 260 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 PGBD4P5-201ENST00000445958 426 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC010531.2-201ENST00000465012 153 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 RPL9P9-202ENST00000466501 579 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 MTND2P14-201ENST00000482139 351 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC104136.1-201ENST00000512969 394 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 RNU6-311P-201ENST00000516224 102 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 RNU2-46P-201ENST00000517038 113 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC005771.1-201ENST00000585581 349 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 FAM106DP-201ENST00000586416 501 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC28Q86X40 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC136475.10-201ENST00000620253 385 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 AC106754.1-201ENST00000562632 1513 ntBASIC0.77□□□□□ -2.29
LRRC28Q86X40 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-37P-201ENST00000362692 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU1-76P-201ENST00000362903 159 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-428P-201ENST00000362942 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-11P-201ENST00000364234 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 Y_RNA.255-201ENST00000364581 97 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU4-28P-201ENST00000364739 141 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-715P-201ENST00000365204 103 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-25P-201ENST00000383873 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-1-201ENST00000383898 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-48P-201ENST00000384161 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-36P-201ENST00000384172 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-4P-201ENST00000384205 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-74P-201ENST00000384235 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-5P-201ENST00000384238 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-3P-201ENST00000384314 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-16P-201ENST00000384385 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-15P-201ENST00000384534 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-2-201ENST00000384627 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-29P-201ENST00000384637 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-9-201ENST00000384776 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-33P-201ENST00000384793 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 MIR520A-201ENST00000384862 85 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 MRPL42P2-201ENST00000403169 426 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-293P-201ENST00000411259 106 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 MTCO3P41-201ENST00000414801 328 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 MTCO1P21-201ENST00000416634 589 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 EIF1P1-201ENST00000421436 341 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC078809.1-201ENST00000427601 140 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 AL133396.1-201ENST00000432048 687 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC244670.1-201ENST00000436879 112 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 HSPE1P13-201ENST00000451143 297 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 SNRPGP9-201ENST00000456025 225 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 MTND3P3-201ENST00000505004 126 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 SNORD27.1-201ENST00000516319 72 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 SNORD60.2-201ENST00000516883 86 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC090578.1-201ENST00000604955 591 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC008945.2-201ENST00000606056 604 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 RNU6-6P-201ENST00000606623 107 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 AP000240.1-201ENST00000609910 452 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 TUSC7.1-201ENST00000610969 165 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 PCGEM1.1-201ENST00000613431 131 ntBASIC0.76□□□□□ -2.29
LRRC28Q86X40 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LRRC28Q86X40 AC010615.1-201ENST00000594254 1764 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 Y_RNA.224-201ENST00000364308 111 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 SNORD31B-201ENST00000364977 69 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 SNORA20.2-201ENST00000383922 131 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 HIGD1AP15-201ENST00000416198 280 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 C1DP2-201ENST00000418167 426 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 MTCO2P34-201ENST00000421994 607 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AL590135.1-201ENST00000422215 156 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC019205.3-201ENST00000424573 156 ntBASIC0.75□□□□□ -2.29
LRRC28Q86X40 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC28Q86X40 AC016700.2-201ENST00000446011 156 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms