Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RNA5SP327-201ENST00000362494 101 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 SNORA63D-201ENST00000364359 132 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LRRC28Q86X40 RNU6-641P-201ENST00000384006 107 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 RNU6-43P-201ENST00000384302 107 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 RNU6-692P-201ENST00000384496 107 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MIR194-1-201ENST00000384892 85 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MIR548B-201ENST00000385247 97 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 RPS29P13-201ENST00000402041 169 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 ELOCP4-201ENST00000420090 333 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AL591043.1-201ENST00000432461 424 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 RPS27AP8-201ENST00000452665 445 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 MTCO2P6-201ENST00000463134 685 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 HMGN2P9-201ENST00000476875 229 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC005741.1-201ENST00000511094 432 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AP003072.2-201ENST00000527756 676 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC022878.1-201ENST00000530684 149 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC015688.6-201ENST00000577737 104 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 MIR3136-201ENST00000583498 78 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 BNIP3P16-201ENST00000589779 534 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MTCO2P2-201ENST00000591258 225 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AL078604.3-201ENST00000615580 211 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 MIR7844-201ENST00000616161 122 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AC022306.3-201ENST00000619930 550 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 AL078595.3-201ENST00000623815 1166 ntBASIC0.8□□□□□ -2.28
LRRC28Q86X40 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.8□□□□□ -2.28
LRRC28Q86X40 RNU6-1141P-201ENST00000364520 107 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RNU6-336P-201ENST00000364891 107 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 SNORA18.2-201ENST00000383865 132 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RNU6-45P-201ENST00000384471 107 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RNU6-360P-201ENST00000390944 104 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AL117342.1-201ENST00000404861 406 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 MIR1267-201ENST00000408723 78 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.79□□□□□ -2.28
LRRC28Q86X40 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC28Q86X40 AL356583.2-201ENST00000426536 280 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RPL23AP95-201ENST00000426806 265 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 PRPS1P1-201ENST00000445305 876 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RPS27P1-201ENST00000450552 247 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 MTCYBP1-201ENST00000454315 1119 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC016925.1-201ENST00000458303 298 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC28Q86X40 Y_RNA.672-201ENST00000516289 104 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC023050.3-201ENST00000541142 333 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 RAB11AP2-201ENST00000545905 639 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC087883.1-201ENST00000551882 391 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 VN1R107P-201ENST00000601784 209 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC112191.3-201ENST00000604371 277 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
LRRC28Q86X40 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 AC011155.2-201ENST00000623202 216 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
LRRC28Q86X40 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
LRRC28Q86X40 RNU6-179P-201ENST00000363350 107 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 U3.4-201ENST00000363352 213 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNU6-414P-201ENST00000363705 104 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNU6-1303P-201ENST00000364841 107 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 Y_RNA.324-201ENST00000365165 102 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNU5E-5P-201ENST00000365379 116 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 SNORA32.2-201ENST00000384049 122 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNU6-550P-201ENST00000391057 101 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNA5SP111-201ENST00000411386 101 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 HMGN1P14-201ENST00000412459 517 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL117339.3-201ENST00000418733 162 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL354692.1-201ENST00000423044 315 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL590556.1-201ENST00000423231 483 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
LRRC28Q86X40 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.78□□□□□ -2.28
LRRC28Q86X40 SNAP23P1-201ENST00000433229 246 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC104850.1-201ENST00000435940 476 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 HSPE1P9-201ENST00000440046 311 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC116562.3-201ENST00000506136 177 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC074344.1-201ENST00000512823 224 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 MTCO3P28-201ENST00000513351 515 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RN7SKP265-201ENST00000516448 223 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC068587.5-201ENST00000528506 175 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.78□□□□□ -2.28
LRRC28Q86X40 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC110760.3-201ENST00000598794 467 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
LRRC28Q86X40 CTHRC1P1-201ENST00000605383 469 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms