Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.07□□□□□ -1.76
NFKB1P19838 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NFKB1P19838 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NFKB1P19838 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
NFKB1P19838 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NFKB1P19838 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NFKB1P19838 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
NFKB1P19838 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.06□□□□□ -1.76
NFKB1P19838 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NFKB1P19838 RNU6-1048P-201ENST00000364054 107 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 Y_RNA.368-201ENST00000365547 113 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 Y_RNA.572-201ENST00000384757 98 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 RNA5SP201-201ENST00000410316 124 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AC004866.1-201ENST00000411748 78 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.06□□□□□ -1.76
NFKB1P19838 AC010154.1-201ENST00000425857 269 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 TBCAP1-201ENST00000436520 327 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.06□□□□□ -1.76
NFKB1P19838 AL161651.1-201ENST00000440882 223 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.06□□□□□ -1.76
NFKB1P19838 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.06□□□□□ -1.76
NFKB1P19838 AP000873.1-201ENST00000463987 400 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AC023141.12-201ENST00000512399 199 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 RNU6-1007P-201ENST00000516586 107 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
NFKB1P19838 AC090877.1-201ENST00000561418 344 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AL391813.1-201ENST00000603098 260 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 MIR6867-201ENST00000610636 67 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AL391903.3-201ENST00000612158 163 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 AL591424.2-201ENST00000617023 128 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
NFKB1P19838 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NFKB1P19838 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
NFKB1P19838 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NFKB1P19838 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NFKB1P19838 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NFKB1P19838 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NFKB1P19838 LINC02471-203ENST00000641941 4752 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 Y_RNA.24-201ENST00000362508 103 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 RNA5SP399-201ENST00000364003 117 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 Y_RNA.243-201ENST00000364481 109 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 MIR526A2-201ENST00000390198 65 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.05□□□□□ -1.76
NFKB1P19838 RNU6-453P-201ENST00000516819 85 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 AC027176.1-201ENST00000560204 514 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 PCGEM1.1-201ENST00000613431 131 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 AC005562.2-201ENST00000618264 111 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 MIR3199-2-201ENST00000636243 86 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 AC068205.3-201ENST00000636385 468 ntBASIC4.05□□□□□ -1.76
NFKB1P19838 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.05□□□□□ -1.76
NFKB1P19838 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NFKB1P19838 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
NFKB1P19838 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NFKB1P19838 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
NFKB1P19838 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
NFKB1P19838 SNORA31-201ENST00000362607 130 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 SNORD87-201ENST00000364849 89 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 SNORA1.3-201ENST00000384676 136 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 MIR23A-201ENST00000385245 73 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 RPS26P8-201ENST00000393490 348 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 RNA5SP504-201ENST00000410676 117 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AC006461.1-201ENST00000412637 326 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AL356095.1-201ENST00000417217 199 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 YPEL5P1-201ENST00000419731 367 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AL691449.1-201ENST00000426570 421 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 TOMM22P2-201ENST00000430735 237 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 RPL23AP70-201ENST00000483361 460 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.04□□□□□ -1.76
NFKB1P19838 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
NFKB1P19838 AC105137.2-201ENST00000569073 466 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 LARP7P3-201ENST00000579888 337 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 MIR3690-201ENST00000580266 75 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AL391261.4-201ENST00000616012 481 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 AC073308.1-201ENST00000623696 305 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 MIR492-201ENST00000638676 116 ntBASIC4.04□□□□□ -1.76
NFKB1P19838 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.04□□□□□ -1.76
NFKB1P19838 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
NFKB1P19838 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
NFKB1P19838 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NFKB1P19838 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NFKB1P19838 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NFKB1P19838 AC004944.1-201ENST00000517807 3059 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 RNU6-969P-201ENST00000383900 105 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 SNORA70C-201ENST00000384538 135 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 SNORD37.2-201ENST00000391075 66 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 RPL21P65-201ENST00000406094 466 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 RNU6-855P-201ENST00000410395 104 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 RNU2-52P-201ENST00000410680 190 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.03□□□□□ -1.76
NFKB1P19838 RN7SL132P-201ENST00000478131 296 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 HIGD1AP1-201ENST00000550979 275 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 MIR1254-2-201ENST00000579553 63 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms