Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PKP4Q99569 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
PKP4Q99569 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PKP4Q99569 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PKP4Q99569 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PKP4Q99569 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PKP4Q99569 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.66□□□□□ -1.98
PKP4Q99569 ADAM3A-203ENST00000461344 2157 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 Y_RNA.496-201ENST00000384444 101 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AL139095.1-201ENST00000404326 391 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.66□□□□□ -1.98
PKP4Q99569 RNU6-174P-201ENST00000410406 106 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP4Q99569 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP4Q99569 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.66□□□□□ -1.98
PKP4Q99569 AC008267.5-201ENST00000424928 265 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 RPS15AP10-201ENST00000432472 382 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AL160004.2-201ENST00000432935 350 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.66□□□□□ -1.98
PKP4Q99569 AL031274.1-201ENST00000450334 232 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.66□□□□□ -1.98
PKP4Q99569 AC068781.1-201ENST00000488231 618 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.66□□□□□ -1.98
PKP4Q99569 ACA59.1-201ENST00000515966 143 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 RNU6-1137P-201ENST00000517073 99 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 SNORD116.3-201ENST00000517176 78 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PKP4Q99569 CPDP1-201ENST00000579660 283 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 LARP7P3-201ENST00000579888 337 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 MIR4680-201ENST00000580906 66 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PKP4Q99569 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.66□□□□□ -1.98
PKP4Q99569 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.66□□□□□ -1.98
PKP4Q99569 AL033523.1-201ENST00000605153 153 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC018889.1-201ENST00000605372 397 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 uc_338.14-201ENST00000613162 166 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC006386.2-201ENST00000624491 75 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 AC012005.1-201ENST00000624575 75 ntBASIC2.66□□□□□ -1.98
PKP4Q99569 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PKP4Q99569 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PKP4Q99569 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
PKP4Q99569 Y_RNA.144-201ENST00000363521 113 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 RNU1-115P-201ENST00000365329 160 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 RNU6-658P-201ENST00000384606 106 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PKP4Q99569 RNU6-985P-201ENST00000410182 104 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
PKP4Q99569 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.65□□□□□ -1.99
PKP4Q99569 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.65□□□□□ -1.99
PKP4Q99569 AL358176.2-201ENST00000425769 204 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.65□□□□□ -1.99
PKP4Q99569 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 AC021146.2-201ENST00000504736 556 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.65□□□□□ -1.99
PKP4Q99569 RNU6-120P-201ENST00000516077 103 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.65□□□□□ -1.99
PKP4Q99569 SUB1P3-201ENST00000564581 315 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 AC008121.1-201ENST00000603244 268 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PKP4Q99569 AC080128.1-201ENST00000474389 1917 ntBASIC2.65□□□□□ -1.99
PKP4Q99569 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKP4Q99569 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.65□□□□□ -1.99
PKP4Q99569 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PKP4Q99569 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.64□□□□□ -1.99
PKP4Q99569 Y_RNA.133-201ENST00000363428 110 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RNU6-827P-201ENST00000365553 106 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RNU6-1105P-201ENST00000384774 107 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AL117339.3-201ENST00000418733 162 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 AC099799.1-201ENST00000439809 192 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RPL9P9-202ENST00000466501 579 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AC097462.2-201ENST00000504623 481 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 RNA5SP76-201ENST00000516277 87 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 EIF4BP1-201ENST00000554881 351 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.64□□□□□ -1.99
PKP4Q99569 AC023824.2-201ENST00000566185 400 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PKP4Q99569 MIR4273-201ENST00000582824 84 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.64□□□□□ -1.99
PKP4Q99569 AC009314.1-201ENST00000603871 304 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 AC091152.3-201ENST00000604227 325 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 MIR6733-201ENST00000635723 61 ntBASIC2.64□□□□□ -1.99
PKP4Q99569 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.63□□□□□ -1.99
PKP4Q99569 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms