Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU6-438P-201ENST00000365561 103 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 RNU6-1029P-201ENST00000384109 107 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 MIR1-2-201ENST00000384961 85 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 SNORA40.3-201ENST00000390964 122 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 RPL31P35-201ENST00000431058 377 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AL033528.1-201ENST00000453780 140 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC114801.2-201ENST00000503825 781 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC097473.1-201ENST00000508142 408 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 SNORD27.1-201ENST00000516319 72 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 HSPE1P4-201ENST00000550617 308 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC008015.1-201ENST00000555505 465 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 MIR3923-201ENST00000579521 83 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC091805.2-201ENST00000603848 235 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC024933.1-201ENST00000608472 348 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AP001506.1-201ENST00000615444 211 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AF246928.1-201ENST00000623768 87 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 AC079248.2-201ENST00000623779 326 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 RNU6-112P-201ENST00000363599 104 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 SNORA72.3-201ENST00000365074 132 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 RNU6-108P-201ENST00000365558 107 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 RNU6-393P-201ENST00000384475 107 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 MTCYBP2-201ENST00000407745 171 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 MIR1261-201ENST00000408659 82 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 RNU4-46P-201ENST00000410818 138 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 HMGN1P14-201ENST00000412459 517 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 RPL21P111-201ENST00000418453 477 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC013410.2-201ENST00000422627 201 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 MTCO3P46-201ENST00000425787 232 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC078809.1-201ENST00000427601 140 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC010095.1-201ENST00000443543 144 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 RPS29P15-201ENST00000458329 171 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC087477.1-201ENST00000465747 340 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 HMGN1P13-201ENST00000505795 138 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 LRRC34P2-201ENST00000514850 553 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 ZNF321P-202ENST00000550843 495 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC012507.3-201ENST00000603556 477 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 AC122133.1-201ENST00000613964 233 ntBASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.16
LRRC40Q9H9A6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 RNU6-553P-201ENST00000364047 96 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 MTND3P17-201ENST00000416968 344 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC139712.2-201ENST00000424302 339 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AL121890.1-201ENST00000435457 205 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 PRPS1P1-201ENST00000445305 876 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC013470.1-201ENST00000453438 462 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 RNU6-759P-201ENST00000516740 103 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 VN1R107P-201ENST00000601784 209 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC006566.1-201ENST00000608943 513 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 AC022418.1-201ENST00000624118 445 ntBASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LRRC40Q9H9A6 SNORD32A-201ENST00000364805 84 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 Y_RNA.480-201ENST00000384364 102 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 RNU6-434P-201ENST00000384376 107 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 RN7SKP61-201ENST00000410642 295 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AC007098.1-201ENST00000420122 367 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL513185.2-201ENST00000425543 193 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 MTCO1P44-201ENST00000441935 243 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL031274.1-201ENST00000450334 232 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 MTCO2P6-201ENST00000463134 685 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 ATP5EP1-201ENST00000510257 156 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms