Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 Y_RNA.135-201ENST00000363439 95 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 Y_RNA.212-201ENST00000364177 102 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-336P-201ENST00000364891 107 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 Y_RNA.530-201ENST00000384587 101 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 SNORD37.1-201ENST00000390968 65 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-332P-201ENST00000391193 108 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-1148P-201ENST00000410992 104 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC097463.2-201ENST00000421074 142 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL365400.1-201ENST00000431854 640 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 NDUFA5P4-201ENST00000436704 385 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCLP35914 FABP5P14-201ENST00000437273 393 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCLP35914 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCLP35914 AL441985.1-201ENST00000457727 251 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNA5SP112-201ENST00000515937 99 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC087854.1-201ENST00000519706 414 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCLP35914 PSMA3P-201ENST00000555485 635 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCLP35914 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.03□□□□□ -2.08
HMGCLP35914 AC068944.2-201ENST00000610373 403 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 U6atac.1-201ENST00000616025 117 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCLP35914 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCLP35914 RNU6-877P-201ENST00000383868 107 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 MIR95-201ENST00000385072 81 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 FGF7P8-201ENST00000402994 292 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-23P-201ENST00000410545 195 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AIMP1P2-201ENST00000425294 312 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 TOMM20P4-201ENST00000427861 435 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 SNAP23P1-201ENST00000433229 246 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCLP35914 RBMX2P4-201ENST00000441256 376 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC243964.1-201ENST00000441814 261 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
HMGCLP35914 AL021397.1-201ENST00000451806 248 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 TRBVA-201ENST00000498804 316 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 SNORA19.2-201ENST00000516013 114 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU6-358P-201ENST00000516564 75 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.02□□□□□ -2.09
HMGCLP35914 MIR4765-201ENST00000585007 77 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC096772.1-201ENST00000609146 564 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC013412.1-201ENST00000610687 192 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCLP35914 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
HMGCLP35914 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 OR56A5-201ENST00000340110 738 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU6-1285P-201ENST00000363480 105 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 Y_RNA.248-201ENST00000364501 109 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU6-1329P-201ENST00000365664 107 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.01□□□□□ -2.09
HMGCLP35914 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGCLP35914 AC003685.2-201ENST00000422795 395 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 BX276092.3-201ENST00000424182 230 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AL513185.2-201ENST00000425543 193 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RPL23AP95-201ENST00000426806 265 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC027124.2-201ENST00000428249 105 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 USP9YP8-201ENST00000441913 500 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AL359672.1-201ENST00000442302 409 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGCLP35914 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGCLP35914 RPL36AP48-201ENST00000485521 314 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC083904.1-201ENST00000487828 231 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RPL22P13-201ENST00000493291 347 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC069439.1-201ENST00000494739 167 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms