Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC008752.3-201ENST00000588113 712 ntBASIC1.59□□□□□ -2.15
LRRC40Q9H9A6 AC110760.3-201ENST00000598794 467 ntBASIC1.59□□□□□ -2.15
LRRC40Q9H9A6 Z99289.3-201ENST00000605586 594 ntBASIC1.59□□□□□ -2.15
LRRC40Q9H9A6 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
LRRC40Q9H9A6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.59□□□□□ -2.15
LRRC40Q9H9A6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.59□□□□□ -2.16
LRRC40Q9H9A6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.16
LRRC40Q9H9A6 RNU6-1141P-201ENST00000364520 107 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 RNU6-1303P-201ENST00000364841 107 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 MIR454-201ENST00000390180 115 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 MIR1289-2-201ENST00000408360 111 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 HIGD1AP15-201ENST00000416198 280 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AL590135.1-201ENST00000422215 156 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC019205.3-201ENST00000424573 156 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC010975.2-201ENST00000427781 588 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AL669831.1-202ENST00000428504 417 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC244670.1-201ENST00000436879 112 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 GTF2IP13-201ENST00000438487 386 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC016700.2-201ENST00000446011 156 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 RNU7-182P-201ENST00000459009 62 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 snoU13.26-201ENST00000459452 105 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC015911.1-201ENST00000495111 156 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC096745.1-201ENST00000509945 370 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 MTCO3P7-201ENST00000510008 774 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 RN7SKP265-201ENST00000516448 223 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 MIR4775-201ENST00000581168 75 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
LRRC40Q9H9A6 RNU4-56P-201ENST00000364700 142 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 RNU6-74P-201ENST00000384235 107 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AL031577.2-201ENST00000404133 280 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC123900.1-201ENST00000420390 96 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 RNU7-125P-201ENST00000458760 62 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 RNU1-131P-201ENST00000458943 161 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 RNA5SP503-201ENST00000517047 117 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC109446.1-201ENST00000566172 220 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 BNIP3P16-201ENST00000589779 534 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC107304.1-201ENST00000604229 296 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC025811.1-201ENST00000604312 472 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 MIR98-201ENST00000606724 119 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 SEPT14P19-203ENST00000633205 211 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AC241585.2-209ENST00000638217 143 ntBASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
LRRC40Q9H9A6 AP000560.1-201ENST00000624150 1937 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 RNU6-428P-201ENST00000362942 107 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 RNU6-336P-201ENST00000364891 107 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 MTCO3P41-201ENST00000414801 328 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 CYCSP49-201ENST00000420810 319 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AL596276.1-201ENST00000434465 418 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AC025465.3-201ENST00000510570 311 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 RNU6-232P-201ENST00000517144 64 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AC009094.1-201ENST00000564443 426 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AL158827.2-201ENST00000602494 330 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AC008945.2-201ENST00000606056 604 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AL603839.4-201ENST00000624658 1005 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 AL691447.3-201ENST00000635020 330 ntBASIC1.56□□□□□ -2.16
LRRC40Q9H9A6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC009961.2-201ENST00000435771 251 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 SNRPEP8-201ENST00000442866 260 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 snoU13.9-201ENST00000458927 103 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 SNORA31.16-201ENST00000516773 139 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AP003072.2-201ENST00000527756 676 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC027807.1-201ENST00000559921 996 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 MIR5094-201ENST00000578766 85 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 Z84480.1-201ENST00000605131 311 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 AC022513.1-201ENST00000624512 117 ntBASIC1.55□□□□□ -2.16
LRRC40Q9H9A6 Y_RNA.67-201ENST00000362870 100 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 U3.4-201ENST00000363352 213 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 RNU6-1097P-201ENST00000363586 107 ntBASIC1.54□□□□□ -2.16
LRRC40Q9H9A6 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms