Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU7-138P-201ENST00000459479 64 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC090515.1-201ENST00000465295 476 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGCLP35914 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCLP35914 FAM206BP-201ENST00000510179 541 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCLP35914 HSPE1P18-201ENST00000517602 280 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC069113.1-201ENST00000517763 267 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGCLP35914 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 SNORA59B-202ENST00000578183 701 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 MIR4648-201ENST00000580107 72 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 MIR5692C1-201ENST00000585309 91 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCLP35914 AC107304.1-201ENST00000604229 296 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC021646.1-201ENST00000605469 484 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGCLP35914 Z82243.1-201ENST00000609432 473 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCLP35914 AC080128.1-201ENST00000474389 1917 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 MTND4P27-201ENST00000450813 1354 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
HMGCLP35914 RBBP8P1-201ENST00000449447 1844 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-37P-201ENST00000362692 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 U8.2-201ENST00000363156 134 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 Y_RNA.157-201ENST00000363638 102 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-11P-201ENST00000364234 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 Y_RNA.295-201ENST00000364918 102 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU5E-7P-201ENST00000365290 117 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-25P-201ENST00000383873 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-1-201ENST00000383898 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-48P-201ENST00000384161 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-36P-201ENST00000384172 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-4P-201ENST00000384205 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 SNORA70B-201ENST00000384210 135 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-5P-201ENST00000384238 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-3P-201ENST00000384314 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-16P-201ENST00000384385 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 SNORD116-20-201ENST00000384529 92 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-15P-201ENST00000384534 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-2-201ENST00000384627 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-29P-201ENST00000384637 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-9-201ENST00000384776 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-33P-201ENST00000384793 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCLP35914 MRPS10P2-201ENST00000431226 381 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGCLP35914 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCLP35914 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 AC008526.1-201ENST00000509149 338 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 RNU1-41P-201ENST00000516161 162 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU1-48P-201ENST00000516400 162 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-1038P-201ENST00000516516 104 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 SCARNA3-201ENST00000517097 143 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCLP35914 AC100830.2-201ENST00000581636 240 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGCLP35914 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 AC092747.3-201ENST00000603769 301 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-6P-201ENST00000606623 107 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCLP35914 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 AL161423.1-201ENST00000613700 262 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGCLP35914 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGCLP35914 AC027514.1-201ENST00000588561 1603 ntBASIC2.05□□□□□ -2.08
HMGCLP35914 RNU6-486P-201ENST00000363116 107 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 Y_RNA.100-201ENST00000363141 102 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 Y_RNA.453-201ENST00000384223 109 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCLP35914 Y_RNA.615-201ENST00000410769 117 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 RPL30P4-201ENST00000429309 333 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 Z98742.2-201ENST00000431564 187 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 HMGB1P31-201ENST00000437242 427 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 MTCO2P3-201ENST00000442543 421 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCLP35914 RPL32P28-201ENST00000443577 397 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 MTCYBP18-201ENST00000501056 747 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 RNU6-718P-201ENST00000516166 105 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 AP005597.4-201ENST00000526762 229 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCLP35914 BNIP3P16-201ENST00000589779 534 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 AC006504.8-201ENST00000621046 635 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
HMGCLP35914 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
HMGCLP35914 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
HMGCLP35914 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGCLP35914 AC138393.1-203ENST00000327086 343 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-254P-201ENST00000363377 107 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms