Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SNORA38.1-201ENST00000364172 131 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 Y_RNA.319-201ENST00000365138 92 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 Y_RNA.483-201ENST00000384380 101 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 SNORA48.5-201ENST00000391143 135 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 RPS15AP7-201ENST00000439294 405 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AC010469.2-201ENST00000496412 480 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 RNU6-388P-201ENST00000517012 105 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 RNU6-389P-201ENST00000517048 105 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 RNU6-570P-201ENST00000517051 105 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AC244505.7-201ENST00000599675 272 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 AL136164.4-201ENST00000625013 2135 ntBASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TMEM88BA6NKF7 RBBP8P1-201ENST00000449447 1844 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 SNORA20.1-201ENST00000364790 130 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 RNU6-806P-201ENST00000365147 105 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 RNU1-44P-201ENST00000384453 163 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 MT-TW-201ENST00000387382 68 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 MRPL35P1-201ENST00000404272 572 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AP000567.1-201ENST00000406413 156 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AC096649.2-201ENST00000416186 393 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 Z98949.2-201ENST00000440996 144 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 RNU6-91P-201ENST00000607774 107 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AF127577.6-201ENST00000623352 2191 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AC010733.2-201ENST00000589496 5702 ntBASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.62□□□□□ -1.67
TMEM88BA6NKF7 AC073073.2-201ENST00000609827 2578 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AC083843.3-201ENST00000623679 2186 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RNU6-222P-201ENST00000362438 107 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 MIR548H3-201ENST00000408771 118 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AC010099.1-201ENST00000455434 375 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AP000870.1-201ENST00000472927 406 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 SNORA31.6-201ENST00000516241 130 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RNU5B-3P-201ENST00000516601 115 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RNU6-1012P-201ENST00000516606 109 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RNA5SP54-201ENST00000516951 92 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AC240442.1-201ENST00000616055 283 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 SNORA43.4-201ENST00000629559 138 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 AC018529.3-201ENST00000624212 2254 ntBASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TMEM88BA6NKF7 MTND5P6-201ENST00000422338 1798 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 RNA5SP399-201ENST00000364003 117 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 RNU6-280P-201ENST00000364145 104 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 RNU6-622P-201ENST00000384272 103 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 Y_RNA.515-201ENST00000384535 112 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 EI24P2-201ENST00000397776 1076 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 RNU6-130P-201ENST00000411112 103 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AL714022.1-201ENST00000439897 151 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 RPL30P12-201ENST00000474666 353 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AP001025.1-201ENST00000486139 332 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AC026784.1-201ENST00000507986 352 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 MIR4659A-201ENST00000580269 81 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AC005296.1-201ENST00000616145 209 ntBASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 434.4 ms