Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
PTX3P26022 VN1R91P-201ENST00000594377 169 ntBASIC3.6□□□□□ -1.83
PTX3P26022 AC006077.1-201ENST00000604746 343 ntBASIC3.6□□□□□ -1.83
PTX3P26022 AC138305.3-201ENST00000624988 240 ntBASIC3.6□□□□□ -1.83
PTX3P26022 ADAM3A-203ENST00000461344 2157 ntBASIC3.6□□□□□ -1.83
PTX3P26022 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTX3P26022 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTX3P26022 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTX3P26022 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTX3P26022 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
PTX3P26022 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
PTX3P26022 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTX3P26022 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PTX3P26022 Y_RNA.149-201ENST00000363558 117 ntBASIC3.59□□□□□ -1.83
PTX3P26022 SNORD14.1-201ENST00000365609 90 ntBASIC3.59□□□□□ -1.83
PTX3P26022 Y_RNA.557-201ENST00000384680 107 ntBASIC3.59□□□□□ -1.83
PTX3P26022 SAR1AP2-201ENST00000392696 594 ntBASIC3.59□□□□□ -1.83
PTX3P26022 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTX3P26022 FTH1P15-201ENST00000406984 280 ntBASIC3.59□□□□□ -1.83
PTX3P26022 Y_RNA.605-201ENST00000410577 105 ntBASIC3.59□□□□□ -1.83
PTX3P26022 EIF1AXP1-201ENST00000419267 435 ntBASIC3.59□□□□□ -1.83
PTX3P26022 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTX3P26022 AL714022.1-201ENST00000439897 151 ntBASIC3.59□□□□□ -1.83
PTX3P26022 AC243964.1-201ENST00000441814 261 ntBASIC3.59□□□□□ -1.83
PTX3P26022 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.59□□□□□ -1.83
PTX3P26022 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.59□□□□□ -1.83
PTX3P26022 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
PTX3P26022 SNRPGP3-201ENST00000469405 227 ntBASIC3.59□□□□□ -1.83
PTX3P26022 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
PTX3P26022 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.59□□□□□ -1.83
PTX3P26022 AC006199.1-201ENST00000548728 219 ntBASIC3.59□□□□□ -1.83
PTX3P26022 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.59□□□□□ -1.83
PTX3P26022 AC104581.2-201ENST00000572227 430 ntBASIC3.59□□□□□ -1.83
PTX3P26022 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.59□□□□□ -1.83
PTX3P26022 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.59□□□□□ -1.83
PTX3P26022 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.59□□□□□ -1.83
PTX3P26022 AC068831.7-201ENST00000616954 363 ntBASIC3.59□□□□□ -1.83
PTX3P26022 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.59□□□□□ -1.83
PTX3P26022 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
PTX3P26022 MIR3529-201ENST00000637713 78 ntBASIC3.59□□□□□ -1.83
PTX3P26022 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTX3P26022 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTX3P26022 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTX3P26022 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTX3P26022 ZNF826P-207ENST00000622273 1910 ntBASIC3.58□□□□□ -1.84
PTX3P26022 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTX3P26022 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTX3P26022 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTX3P26022 Y_RNA.152-201ENST00000363578 100 ntBASIC3.58□□□□□ -1.84
PTX3P26022 Y_RNA.176-201ENST00000363815 109 ntBASIC3.58□□□□□ -1.84
PTX3P26022 Y_RNA.485-201ENST00000384395 102 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR30B-201ENST00000384850 88 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.58□□□□□ -1.84
PTX3P26022 AC092423.1-201ENST00000430165 186 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
PTX3P26022 CYCSP32-201ENST00000440548 321 ntBASIC3.58□□□□□ -1.84
PTX3P26022 RNU7-23P-201ENST00000459465 62 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.58□□□□□ -1.84
PTX3P26022 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.58□□□□□ -1.84
PTX3P26022 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.58□□□□□ -1.84
PTX3P26022 AC008269.2-201ENST00000561915 1105 ntBASIC3.58□□□□□ -1.84
PTX3P26022 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.58□□□□□ -1.84
PTX3P26022 AC009163.5-201ENST00000575421 637 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR5188-201ENST00000583467 113 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AC060766.3-201ENST00000591442 263 ntBASIC3.58□□□□□ -1.84
PTX3P26022 AL355297.3-201ENST00000604082 446 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR1244-1-201ENST00000612829 85 ntBASIC3.58□□□□□ -1.84
PTX3P26022 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.58□□□□□ -1.84
PTX3P26022 AC087588.2-201ENST00000617667 426 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR1244-3-201ENST00000635744 85 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR1244-2-201ENST00000636449 85 ntBASIC3.58□□□□□ -1.84
PTX3P26022 MIR1244-4-202ENST00000636813 85 ntBASIC3.58□□□□□ -1.84
PTX3P26022 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTX3P26022 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTX3P26022 AF127577.6-201ENST00000623352 2191 ntBASIC3.58□□□□□ -1.84
PTX3P26022 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
PTX3P26022 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTX3P26022 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTX3P26022 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTX3P26022 RNU6-858P-201ENST00000362436 107 ntBASIC3.57□□□□□ -1.84
PTX3P26022 RNA5SP295-201ENST00000362655 121 ntBASIC3.57□□□□□ -1.84
PTX3P26022 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTX3P26022 SNORA69.1-201ENST00000390904 137 ntBASIC3.57□□□□□ -1.84
PTX3P26022 MIR1302-3-201ENST00000408128 138 ntBASIC3.57□□□□□ -1.84
PTX3P26022 RNA5SP494-201ENST00000410653 129 ntBASIC3.57□□□□□ -1.84
PTX3P26022 MTCO3P19-201ENST00000415864 321 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AL591419.1-201ENST00000427423 339 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC091390.1-201ENST00000433904 331 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC009541.1-201ENST00000438279 2662 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC007969.2-201ENST00000441891 191 ntBASIC3.57□□□□□ -1.84
PTX3P26022 MTND5P1-201ENST00000445440 1375 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC010099.1-201ENST00000455434 375 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AP002884.2-201ENST00000471647 395 ntBASIC3.57□□□□□ -1.84
PTX3P26022 MED28P2-201ENST00000475771 317 ntBASIC3.57□□□□□ -1.84
PTX3P26022 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PTX3P26022 AC091144.1-201ENST00000519573 138 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC016256.1-201ENST00000547971 354 ntBASIC3.57□□□□□ -1.84
PTX3P26022 AC006504.1-201ENST00000562493 3666 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms