Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Mir5126-201ENSMUST00000175513 77 ntBASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv5-39A0A0G2JDV4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm15173-201ENSMUST00000122049 433 ntBASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm43514-201ENSMUST00000198852 424 ntBASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Igkv5-39A0A0G2JDV4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.08■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm6550-201ENSMUST00000187574 993 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms