Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC023449.1-201ENST00000454464 154 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 RPL23AP62-201ENST00000463396 453 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC098847.1-201ENST00000473094 348 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 OR2AO1P-201ENST00000476497 403 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 RPL7AP6-201ENST00000477943 801 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 SNRPCP11-201ENST00000492453 205 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 HSPE1P18-201ENST00000517602 280 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC018630.3-201ENST00000542637 96 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC244107.2-201ENST00000611773 76 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 AC245014.3-201ENST00000618589 347 ntBASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-1Q9BYR8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
KRTAP3-1Q9BYR8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
KRTAP3-1Q9BYR8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC068647.1-201ENST00000489539 2265 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 TLK1P1-201ENST00000456760 2440 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RPL23P2-201ENST00000320371 421 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SNORA27.1-201ENST00000362604 124 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNU6-655P-201ENST00000362858 107 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SNORA73.1-201ENST00000363107 205 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNU6-309P-201ENST00000364573 106 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNU6-1107P-201ENST00000364817 104 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SNORA72-201ENST00000384339 132 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SNORD56.6-201ENST00000384569 71 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNA5SP129-201ENST00000410276 118 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC083906.5-201ENST00000503722 328 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC018797.1-201ENST00000510791 255 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SCARNA18.1-201ENST00000516330 83 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 SNORA18.4-201ENST00000516440 124 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 RNA5SP438-201ENST00000516561 112 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC097639.2-201ENST00000603159 172 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AC091152.3-201ENST00000604227 325 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AL022345.2-201ENST00000606307 135 ntBASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-1Q9BYR8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 AC026523.2-201ENST00000625039 7739 ntBASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-1Q9BYR8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms