Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
KRTAP3-1Q9BYR8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-1Q9BYR8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-1Q9BYR8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-1Q9BYR8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SNORD114-19-201ENST00000363072 75 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-674P-201ENST00000363831 107 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-19P-201ENST00000384718 107 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 MIR607-201ENST00000385241 96 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 MIRLET7F2-201ENST00000385277 83 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SNORA26.2-201ENST00000390922 122 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RNA5SP431-201ENST00000410312 120 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 PNKDP1-201ENST00000435914 430 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC105137.1-201ENST00000484355 562 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RN7SL362P-201ENST00000494228 267 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC078918.1-201ENST00000498515 228 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC006445.2-201ENST00000510061 472 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RN7SKP238-201ENST00000516483 249 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RNA5SP468-201ENST00000516782 93 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 RMST_8.1-201ENST00000610287 165 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 MIR6721-201ENST00000617181 87 ntBASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-1Q9BYR8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-600P-201ENST00000362524 99 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-294P-201ENST00000364999 102 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU6-106P-201ENST00000384405 107 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 SNORD116-13-201ENST00000384408 92 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 Y_RNA.558-201ENST00000384685 113 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 MIR586-201ENST00000385035 97 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 SNORA12.1-201ENST00000390873 148 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 U6atac.2-201ENST00000408644 118 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNU2-70P-201ENST00000410718 179 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AC126124.2-201ENST00000413542 321 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL445584.1-201ENST00000431451 330 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RPL5P7-201ENST00000444235 813 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RPS3P1-201ENST00000456781 192 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RN7SL254P-201ENST00000460609 284 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RN7SL583P-201ENST00000475692 287 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNA5SP153-201ENST00000516498 76 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 SNORD19.2-201ENST00000516978 73 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RNA5SP340-201ENST00000517132 107 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 FO393422.1-201ENST00000603908 708 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AC005972.2-201ENST00000604690 348 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 RPL17P51-201ENST00000605218 238 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL021707.8-201ENST00000609428 183 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AC069200.1-201ENST00000609511 323 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 MIR6793-201ENST00000612376 63 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AC090607.5-201ENST00000615692 224 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL138880.2-201ENST00000616214 239 ntBASIC2.8□□□□□ -1.96
KRTAP3-1Q9BYR8 AL138693.1-201ENST00000622219 129 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms