Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN4AP35499 AL593851.1-201ENST00000426171 157 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 USP9YP11-201ENST00000427537 717 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 MTND1P32-201ENST00000433043 938 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 AL354941.1-201ENST00000438600 464 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 PGBD4P3-201ENST00000440731 581 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 SNORD11.1-201ENST00000459482 85 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 RPL30P14-201ENST00000482744 348 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 RPS15AP36-201ENST00000492022 382 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 AC022493.1-201ENST00000492984 337 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 HMGB3P3-201ENST00000510526 400 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 AC015720.1-201ENST00000565251 277 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN4AP35499 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.92□□□□□ -2.1
SCN4AP35499 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 AC080013.3-201ENST00000606839 578 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCN4AP35499 AC091965.5-201ENST00000624785 342 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 OR4G1P-203ENST00000641984 1631 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCN4AP35499 MIR767-201ENST00000390228 109 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL590084.2-201ENST00000401481 382 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 MTCO1P17-201ENST00000411522 491 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 TIMM9P1-201ENST00000436122 256 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN4AP35499 AL133217.1-201ENST00000450980 425 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC020699.1-201ENST00000505161 445 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC009901.1-201ENST00000506703 541 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RN7SKP258-201ENST00000517151 304 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU6-711P-201ENST00000517255 106 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 DEFB108A-201ENST00000530110 222 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 PSMA3P-201ENST00000555485 635 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC022022.2-201ENST00000602989 360 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC021171.1-201ENST00000603137 706 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 MTND4LP5-201ENST00000605152 292 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC103710.4-201ENST00000609301 899 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC010133.1-201ENST00000615809 842 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 MIR6734-201ENST00000621166 68 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 MTND1P37-201ENST00000636562 264 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC009812.4-201ENST00000569134 1805 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU6-1214P-201ENST00000363650 109 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU6-288P-201ENST00000363690 104 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU6-777P-201ENST00000364265 104 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNU4-68P-201ENST00000364314 141 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 RNA5SP38-201ENST00000410750 119 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL359704.1-201ENST00000411586 781 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 AL139421.1-201ENST00000423010 169 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC008850.1-201ENST00000427546 362 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 USP12PX-201ENST00000432383 1057 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 BMI1P1-201ENST00000445879 941 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN4AP35499 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 RPF2P2-201ENST00000504693 896 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 LTV1P1-201ENST00000510683 1237 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 SNORA3.4-201ENST00000515969 96 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 MRPS36P3-201ENST00000519284 130 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AP001372.4-201ENST00000524889 472 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AP002748.2-201ENST00000528671 348 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC068587.4-201ENST00000533893 186 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC008015.1-201ENST00000555505 465 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN4AP35499 AC008751.2-201ENST00000597885 980 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 AL109653.1-201ENST00000603091 248 ntBASIC1.91□□□□□ -2.1
SCN4AP35499 CCT4P2-201ENST00000233836 1548 ntBASIC1.9□□□□□ -2.1
SCN4AP35499 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.9□□□□□ -2.1
SCN4AP35499 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SCN4AP35499 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SCN4AP35499 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
SCN4AP35499 SNORA14A-201ENST00000364773 135 ntBASIC1.9□□□□□ -2.11
SCN4AP35499 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN4AP35499 RNU6-1077P-201ENST00000410506 102 ntBASIC1.9□□□□□ -2.11
SCN4AP35499 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN4AP35499 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN4AP35499 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN4AP35499 AP1S2P1-201ENST00000457344 379 ntBASIC1.9□□□□□ -2.11
SCN4AP35499 RNA5SP310-201ENST00000459084 116 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms