Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC004944.1-201ENST00000517807 3059 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL139397.2-201ENST00000404529 772 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 PGBD4P3-201ENST00000440731 581 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 SNORD19.2-201ENST00000516978 73 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AP005902.1-201ENST00000521358 186 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 UBTFL10-201ENST00000528532 562 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AP000889.2-201ENST00000532684 490 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC060771.1-201ENST00000582031 164 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 RPP40P2-201ENST00000603596 712 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC025588.2-201ENST00000604851 466 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL021997.1-201ENST00000605757 193 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC131235.4-201ENST00000609288 620 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC245297.2-201ENST00000610119 565 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC010678.1-201ENST00000614118 713 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC109809.1-201ENST00000619665 545 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 AC079416.3-201ENST00000624479 549 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 MIR3199-2-201ENST00000636243 86 ntBASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCNB1IP1Q9NPC3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.15□□□□□ -2.06
CCNB1IP1Q9NPC3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RNA5SP68-201ENST00000363885 119 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 SNORD116-12-201ENST00000384468 92 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RPS4XP8-201ENST00000402039 771 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 ERHP2-201ENST00000402323 299 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RPL17P12-201ENST00000413391 526 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC244035.1-201ENST00000430042 390 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AL358794.1-201ENST00000445689 381 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC108938.1-201ENST00000451204 136 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC080013.2-201ENST00000460866 323 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC010631.1-201ENST00000474150 156 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AL049873.1-201ENST00000480540 376 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 LINC00888-204ENST00000487386 421 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC026801.1-201ENST00000497178 464 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RNA5SP24-201ENST00000516478 95 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RNU1-103P-201ENST00000516502 125 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RNA5SP148-201ENST00000516527 94 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC091163.3-201ENST00000518269 1144 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 MTND1P36-201ENST00000522384 936 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AL133153.1-201ENST00000557756 303 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AC026790.2-201ENST00000606282 430 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AP002791.1-201ENST00000623291 381 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 AP000676.3-201ENST00000623299 569 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNB1IP1Q9NPC3 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 RNU6-1000P-201ENST00000391066 106 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 HMGN2P10-201ENST00000448085 265 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 MTCO1P27-201ENST00000448269 226 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 AP000542.1-201ENST00000448473 371 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.14□□□□□ -2.07
CCNB1IP1Q9NPC3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms