Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF216Q9NWF9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF216Q9NWF9 AC027575.3-201ENST00000583058 2747 ntBASIC7.58□□□□□ -1.2
RNF216Q9NWF9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 SNORA1-201ENST00000384107 130 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 SNORD116-22-201ENST00000384430 92 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 RNU6-402P-201ENST00000410678 103 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AL353705.1-201ENST00000433468 480 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AC099670.1-201ENST00000455141 783 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 RNA5SP57-201ENST00000459463 123 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 RPL23AP56-201ENST00000460778 453 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 RN7SKP289-201ENST00000517244 295 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AC007537.1-201ENST00000539347 327 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 FTX_3.1-201ENST00000610451 147 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AP005212.3-201ENST00000619964 528 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 5S_rRNA.13-201ENST00000622298 123 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AL162726.3-218ENST00000636401 95 ntBASIC7.57□□□□□ -1.2
RNF216Q9NWF9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF216Q9NWF9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 AL356292.1-201ENST00000283110 373 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 SNURFL-201ENST00000309296 343 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 Y_RNA.66-201ENST00000362862 102 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 RNU6-418P-201ENST00000384035 107 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 MIR325-201ENST00000385260 98 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 Y_RNA.601-201ENST00000410500 113 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 RN7SL160P-201ENST00000468558 284 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 RPS4XP23-201ENST00000487801 237 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 RNU7-149P-201ENST00000516739 59 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC7.56□□□□□ -1.2
RNF216Q9NWF9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RNF216Q9NWF9 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RNU6-271P-201ENST00000363858 105 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RNU4-13P-201ENST00000364019 141 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 MIR889-201ENST00000401280 79 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AL355796.1-201ENST00000406706 323 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AC092047.1-201ENST00000424997 240 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 SNRPBP1-201ENST00000443634 282 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RPL23AP28-201ENST00000448062 470 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AL645939.1-201ENST00000453429 797 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AC080013.2-201ENST00000460866 323 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RPS26P55-201ENST00000471178 356 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 RNU6-581P-201ENST00000516214 105 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 MIR212-201ENST00000586026 110 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AC010329.1-201ENST00000593903 8328 ntBASIC7.55□□□□□ -1.2
RNF216Q9NWF9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF216Q9NWF9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 SNORD115-13-201ENST00000363358 82 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 SNORD115-16-201ENST00000363887 82 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 SNORD115-1-201ENST00000364961 82 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 RNA5SP172-201ENST00000365061 118 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 RNU6-1292P-201ENST00000383856 107 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 Y_RNA.426-201ENST00000384068 113 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 Y_RNA.486-201ENST00000384398 107 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 MIR548D2-201ENST00000384955 97 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 RNU6-644P-201ENST00000391155 98 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 RNA5SP201-201ENST00000410316 124 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 AL591419.1-201ENST00000427423 339 ntBASIC7.54□□□□□ -1.2
RNF216Q9NWF9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF216Q9NWF9 RN7SL70P-201ENST00000478322 302 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms