Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.57■□□□□ 0.24
Thumpd3P97770 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Thumpd3P97770 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd3P97770 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.56■□□□□ 0.24
Thumpd3P97770 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd3P97770 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.55■□□□□ 0.24
Thumpd3P97770 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Gm6659-201ENSMUST00000174752 547 ntBASIC16.55■□□□□ 0.24
Thumpd3P97770 Gm2274-201ENSMUST00000184539 609 ntBASIC16.55■□□□□ 0.24
Thumpd3P97770 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.55■□□□□ 0.24
Thumpd3P97770 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Thumpd3P97770 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd3P97770 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.54■□□□□ 0.24
Thumpd3P97770 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.54■□□□□ 0.24
Thumpd3P97770 Gm27000-201ENSMUST00000182943 842 ntBASIC16.54■□□□□ 0.24
Thumpd3P97770 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Thumpd3P97770 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Thumpd3P97770 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd3P97770 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Thumpd3P97770 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Thumpd3P97770 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.53■□□□□ 0.24
Thumpd3P97770 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms