Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.27□□□□□ -1.576e-22■□□□□ 8.3
NKRFO15226 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 39e-6■□□□□ 8.3
NKRFO15226 SEMA3B-215ENST00000621029 934 ntTSL 533.62■■■□□ 2.979e-6■□□□□ 8.3
NKRFO15226 RELA-211ENST00000527749 771 ntTSL 531.56■■■□□ 2.649e-6■□□□□ 8.3
NKRFO15226 RELA-223ENST00000534283 575 ntTSL 528.36■■■□□ 2.139e-6■□□□□ 8.3
NKRFO15226 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.19e-6■□□□□ 8.3
NKRFO15226 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.07■■□□□ 1.449e-6■□□□□ 8.3
NKRFO15226 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.359e-6■□□□□ 8.3
NKRFO15226 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.199e-6■□□□□ 8.3
NKRFO15226 HPN-204ENST00000593305 2175 ntTSL 221.89■■□□□ 1.19e-6■□□□□ 8.3
NKRFO15226 RELA-221ENST00000533187 456 ntTSL 321.51■■□□□ 1.039e-6■□□□□ 8.3
NKRFO15226 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.999e-6■□□□□ 8.3
NKRFO15226 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.11■□□□□ 0.979e-6■□□□□ 8.3
NKRFO15226 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.959e-6■□□□□ 8.3
NKRFO15226 SEMA3B-211ENST00000612509 1061 ntTSL 520.81■□□□□ 0.929e-6■□□□□ 8.3
NKRFO15226 ARFRP1-205ENST00000610414 1251 ntTSL 220.58■□□□□ 0.896e-9■□□□□ 8.3
NKRFO15226 RELA-215ENST00000529389 992 ntTSL 320.3■□□□□ 0.849e-6■□□□□ 8.3
NKRFO15226 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.15■□□□□ 0.829e-6■□□□□ 8.3
NKRFO15226 SYNJ2-209ENST00000640569 2040 nt20.03■□□□□ 0.89e-6■□□□□ 8.3
NKRFO15226 RELA-224ENST00000534305 666 ntTSL 319.88■□□□□ 0.779e-6■□□□□ 8.3
NKRFO15226 ARFRP1-203ENST00000609188 225 ntTSL 519.88■□□□□ 0.776e-9■□□□□ 8.3
NKRFO15226 ARFRP1-209ENST00000612772 1375 ntTSL 319.62■□□□□ 0.736e-9■□□□□ 8.3
NKRFO15226 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.729e-6■□□□□ 8.3
NKRFO15226 HPN-203ENST00000541345 1820 ntTSL 219.53■□□□□ 0.729e-6■□□□□ 8.3
NKRFO15226 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.619e-6■□□□□ 8.3
NKRFO15226 RELA-218ENST00000532776 602 ntTSL 218.83■□□□□ 0.69e-6■□□□□ 8.3
NKRFO15226 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.74■□□□□ 0.599e-6■□□□□ 8.3
NKRFO15226 RELA-213ENST00000527909 591 ntTSL 518.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 RELA-216ENST00000531238 541 ntTSL 418.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 RELA-222ENST00000533546 569 ntTSL 418.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 HPN-205ENST00000596662 584 ntTSL 418.57■□□□□ 0.569e-6■□□□□ 8.3
NKRFO15226 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.52■□□□□ 0.569e-6■□□□□ 8.3
NKRFO15226 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)18.35■□□□□ 0.539e-6■□□□□ 8.3
NKRFO15226 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.23■□□□□ 0.519e-6■□□□□ 8.3
NKRFO15226 MIR8072-201ENST00000614241 80 ntBASIC17.99■□□□□ 0.479e-6■□□□□ 8.3
NKRFO15226 CNOT6L-207ENST00000515441 572 ntTSL 417.81■□□□□ 0.449e-6■□□□□ 8.3
NKRFO15226 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.379e-6■□□□□ 8.3
NKRFO15226 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.37■□□□□ 0.379e-6■□□□□ 8.3
NKRFO15226 SEMA3B-214ENST00000619119 3158 ntTSL 516.97■□□□□ 0.319e-6■□□□□ 8.3
NKRFO15226 RELA-204ENST00000525658 808 ntTSL 216.85■□□□□ 0.299e-6■□□□□ 8.3
NKRFO15226 TRIP10-212ENST00000600677 2022 ntTSL 516.73■□□□□ 0.279e-6■□□□□ 8.3
NKRFO15226 RELA-220ENST00000532999 1341 ntTSL 516.45■□□□□ 0.229e-6■□□□□ 8.3
NKRFO15226 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.38■□□□□ 0.219e-6■□□□□ 8.3
NKRFO15226 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.15■□□□□ 0.189e-6■□□□□ 8.3
NKRFO15226 TRIP10-203ENST00000595305 2068 ntTSL 216.13■□□□□ 0.179e-6■□□□□ 8.3
NKRFO15226 RELA-225ENST00000534558 692 ntTSL 516.01■□□□□ 0.159e-6■□□□□ 8.3
NKRFO15226 RELA-206ENST00000525858 754 ntTSL 215.8■□□□□ 0.129e-6■□□□□ 8.3
NKRFO15226 RELA-203ENST00000525301 623 ntTSL 315.6■□□□□ 0.099e-6■□□□□ 8.3
NKRFO15226 RELA-208ENST00000526283 2004 ntTSL 515.42■□□□□ 0.069e-6■□□□□ 8.3
NKRFO15226 RELA-210ENST00000527074 585 ntTSL 213.24□□□□□ -0.299e-6■□□□□ 8.3
NKRFO15226 CNOT6L-204ENST00000506166 781 ntTSL 212.68□□□□□ -0.389e-6■□□□□ 8.3
NKRFO15226 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC12.32□□□□□ -0.449e-6■□□□□ 8.3
NKRFO15226 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.59e-6■□□□□ 8.3
NKRFO15226 RELA-219ENST00000532879 567 ntTSL 511.62□□□□□ -0.559e-6■□□□□ 8.3
NKRFO15226 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.589e-6■□□□□ 8.3
NKRFO15226 RELA-217ENST00000531484 2251 ntTSL 211.4□□□□□ -0.589e-6■□□□□ 8.3
NKRFO15226 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.949e-6■□□□□ 8.3
NKRFO15226 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.95□□□□□ -1.149e-6■□□□□ 8.3
NKRFO15226 CNOT6L-202ENST00000504804 1925 ntTSL 56.5□□□□□ -1.379e-6■□□□□ 8.3
NKRFO15226 CNOT6L-206ENST00000512485 1890 ntTSL 56.22□□□□□ -1.419e-6■□□□□ 8.3
NKRFO15226 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.789e-6■□□□□ 8.3
NKRFO15226 C20orf27-203ENST00000399672 1734 ntAPPRIS P1 TSL 228.4■■■□□ 2.142e-6■□□□□ 8.2
NKRFO15226 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.712e-6■□□□□ 8.2
NKRFO15226 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.82■■□□□ 1.242e-6■□□□□ 8.2
NKRFO15226 C20orf27-204ENST00000399683 933 ntTSL 218.69■□□□□ 0.582e-6■□□□□ 8.2
NKRFO15226 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.511e-7■□□□□ 8.2
NKRFO15226 SKP1-206ENST00000519321 692 ntTSL 325.87■■□□□ 1.731e-7■□□□□ 8.2
NKRFO15226 MVD-209ENST00000565149 2352 ntTSL 1 (best)21.4■■□□□ 1.021e-7■□□□□ 8.2
NKRFO15226 SKP1-213ENST00000524288 732 ntTSL 1 (best)7.86□□□□□ -1.151e-7■□□□□ 8.2
NKRFO15226 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.231e-7■□□□□ 8.2
NKRFO15226 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.461e-7■□□□□ 8.2
NKRFO15226 SKP1-205ENST00000519054 654 ntTSL 35.63□□□□□ -1.511e-7■□□□□ 8.2
NKRFO15226 SKP1-201ENST00000328392 572 ntTSL 55.48□□□□□ -1.531e-7■□□□□ 8.2
NKRFO15226 SKP1-212ENST00000523966 899 ntTSL 35.38□□□□□ -1.551e-7■□□□□ 8.2
NKRFO15226 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.631e-7■□□□□ 8.2
NKRFO15226 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.691e-7■□□□□ 8.2
NKRFO15226 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.721e-7■□□□□ 8.2
NKRFO15226 TRAF4-206ENST00000454852 672 ntTSL 312.71□□□□□ -0.374e-10■□□□□ 8.2
NKRFO15226 HIPK3-205ENST00000531504 591 ntTSL 223.48■■□□□ 1.353e-7■□□□□ 8.2
NKRFO15226 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.013e-7■□□□□ 8.2
NKRFO15226 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■□□□□ 8.2
NKRFO15226 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■□□□□ 8.2
NKRFO15226 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.083e-7■□□□□ 8.2
NKRFO15226 AGPAT3-207ENST00000445582 582 ntTSL 314.45□□□□□ -0.13e-7■□□□□ 8.2
NKRFO15226 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.06□□□□□ -0.163e-7■□□□□ 8.2
NKRFO15226 AGPAT3-208ENST00000448287 454 ntTSL 313.64□□□□□ -0.233e-7■□□□□ 8.2
NKRFO15226 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.323e-7■□□□□ 8.2
NKRFO15226 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.9□□□□□ -0.983e-7■□□□□ 8.2
NKRFO15226 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.593e-7■□□□□ 8.2
NKRFO15226 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.272e-12■□□□□ 8.1
NKRFO15226 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)18.74■□□□□ 0.592e-12■□□□□ 8.1
NKRFO15226 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)16.53■□□□□ 0.242e-12■□□□□ 8.1
NKRFO15226 CBX4-203ENST00000494546 432 ntTSL 338.46■■■■□ 3.753e-6■□□□□ 8.1
NKRFO15226 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.33■■■■□ 3.733e-6■□□□□ 8.1
NKRFO15226 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.263e-6■□□□□ 8.1
NKRFO15226 SSSCA1-207ENST00000533115 1077 ntTSL 335.08■■■■□ 3.213e-6■□□□□ 8.1
NKRFO15226 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.14■■■■□ 3.063e-6■□□□□ 8.1
NKRFO15226 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.66■■■□□ 2.666e-7■□□□□ 8.1
NKRFO15226 RCC1-212ENST00000486790 481 ntTSL 531.12■■■□□ 2.573e-6■□□□□ 8.1
NKRFO15226 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.02■■■□□ 2.563e-6■□□□□ 8.1
Retrieved 100 of 9,198 protein–RNA pairs in 335.7 ms