Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm8097-201ENSMUST00000117903 829 ntBASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm25990-201ENSMUST00000102440 86 ntBASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm13418-201ENSMUST00000119097 944 ntBASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv5-39A0A0G2JDV4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm18733-201ENSMUST00000173950 856 ntBASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm10060-201ENSMUST00000212002 111 ntBASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv5-39A0A0G2JDV4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv5-39A0A0G2JDV4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms