Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12728V9GX31 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.54■□□□□ 0.56
Gm12728V9GX31 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12728V9GX31 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Gm12728V9GX31 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12728V9GX31 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12728V9GX31 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12728V9GX31 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12728V9GX31 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12728V9GX31 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm12728V9GX31 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.52■□□□□ 0.56
Gm12728V9GX31 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm12728V9GX31 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12728V9GX31 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12728V9GX31 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12728V9GX31 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12728V9GX31 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12728V9GX31 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12728V9GX31 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12728V9GX31 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12728V9GX31 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12728V9GX31 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm12728V9GX31 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12728V9GX31 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Gm12728V9GX31 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12728V9GX31 Gm9397-201ENSMUST00000200125 605 ntBASIC18.48■□□□□ 0.55
Gm12728V9GX31 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm12728V9GX31 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12728V9GX31 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12728V9GX31 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12728V9GX31 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm12728V9GX31 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12728V9GX31 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.46■□□□□ 0.55
Gm12728V9GX31 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm12728V9GX31 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm12728V9GX31 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Gm12728V9GX31 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm12728V9GX31 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12728V9GX31 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12728V9GX31 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12728V9GX31 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12728V9GX31 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Gm12728V9GX31 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12728V9GX31 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12728V9GX31 Gm24970-201ENSMUST00000175582 82 ntBASIC18.44■□□□□ 0.54
Gm12728V9GX31 Gm30023-201ENSMUST00000197970 889 ntBASIC18.44■□□□□ 0.54
Gm12728V9GX31 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12728V9GX31 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12728V9GX31 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12728V9GX31 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12728V9GX31 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.43■□□□□ 0.54
Gm12728V9GX31 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.43■□□□□ 0.54
Gm12728V9GX31 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm12728V9GX31 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12728V9GX31 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gm12728V9GX31 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12728V9GX31 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12728V9GX31 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12728V9GX31 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12728V9GX31 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12728V9GX31 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm12728V9GX31 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12728V9GX31 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12728V9GX31 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12728V9GX31 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.39■□□□□ 0.54
Gm12728V9GX31 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.39■□□□□ 0.54
Gm12728V9GX31 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Gm12728V9GX31 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm12728V9GX31 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm12728V9GX31 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm12728V9GX31 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12728V9GX31 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.38■□□□□ 0.53
Gm12728V9GX31 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12728V9GX31 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12728V9GX31 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12728V9GX31 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12728V9GX31 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12728V9GX31 Gm45855-201ENSMUST00000212546 880 ntBASIC18.36■□□□□ 0.53
Gm12728V9GX31 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm12728V9GX31 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm12728V9GX31 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12728V9GX31 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12728V9GX31 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12728V9GX31 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12728V9GX31 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12728V9GX31 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.35■□□□□ 0.53
Gm12728V9GX31 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.35■□□□□ 0.53
Gm12728V9GX31 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12728V9GX31 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.34■□□□□ 0.53
Gm12728V9GX31 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12728V9GX31 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12728V9GX31 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm12728V9GX31 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm12728V9GX31 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm12728V9GX31 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm12728V9GX31 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm12728V9GX31 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Gm12728V9GX31 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12728V9GX31 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12728V9GX31 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms