Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm5493S4R2D1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm5493S4R2D1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gm5493S4R2D1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5493S4R2D1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5493S4R2D1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5493S4R2D1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm5493S4R2D1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5493S4R2D1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5493S4R2D1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5493S4R2D1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5493S4R2D1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5493S4R2D1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm5493S4R2D1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gm5493S4R2D1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm5493S4R2D1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm5493S4R2D1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm5493S4R2D1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5493S4R2D1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5493S4R2D1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Gm5493S4R2D1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5493S4R2D1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm5493S4R2D1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5493S4R2D1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5493S4R2D1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5493S4R2D1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5493S4R2D1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5493S4R2D1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5493S4R2D1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5493S4R2D1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gm5493S4R2D1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5493S4R2D1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5493S4R2D1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gm5493S4R2D1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5493S4R2D1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Gm5493S4R2D1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5493S4R2D1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5493S4R2D1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5493S4R2D1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5493S4R2D1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.52■□□□□ 0.71
Gm5493S4R2D1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm5493S4R2D1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5493S4R2D1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5493S4R2D1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Gm5493S4R2D1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5493S4R2D1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5493S4R2D1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Gm5493S4R2D1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm5493S4R2D1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5493S4R2D1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5493S4R2D1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm5493S4R2D1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.46■□□□□ 0.71
Gm5493S4R2D1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Gm5493S4R2D1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5493S4R2D1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5493S4R2D1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.43■□□□□ 0.7
Gm5493S4R2D1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Gm5493S4R2D1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5493S4R2D1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.42■□□□□ 0.7
Gm5493S4R2D1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5493S4R2D1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5493S4R2D1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5493S4R2D1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms