Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Atp6v1c1Q9Z1G3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Atp6v1c1Q9Z1G3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atp6v1c1Q9Z1G3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atp6v1c1Q9Z1G3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atp6v1c1Q9Z1G3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atp6v1c1Q9Z1G3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Atp6v1c1Q9Z1G3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atp6v1c1Q9Z1G3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Atp6v1c1Q9Z1G3 Zfp131-205ENSMUST00000223812 663 ntBASIC22.61■■□□□ 1.21
Atp6v1c1Q9Z1G3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atp6v1c1Q9Z1G3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atp6v1c1Q9Z1G3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Atp6v1c1Q9Z1G3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1c1Q9Z1G3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1c1Q9Z1G3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1c1Q9Z1G3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atp6v1c1Q9Z1G3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1c1Q9Z1G3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.59■■□□□ 1.21
Atp6v1c1Q9Z1G3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atp6v1c1Q9Z1G3 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.59■■□□□ 1.21
Atp6v1c1Q9Z1G3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1c1Q9Z1G3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1c1Q9Z1G3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atp6v1c1Q9Z1G3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atp6v1c1Q9Z1G3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Atp6v1c1Q9Z1G3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atp6v1c1Q9Z1G3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Atp6v1c1Q9Z1G3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Atp6v1c1Q9Z1G3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1c1Q9Z1G3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atp6v1c1Q9Z1G3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.55■■□□□ 1.2
Atp6v1c1Q9Z1G3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Atp6v1c1Q9Z1G3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atp6v1c1Q9Z1G3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atp6v1c1Q9Z1G3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.53■■□□□ 1.2
Atp6v1c1Q9Z1G3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Atp6v1c1Q9Z1G3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atp6v1c1Q9Z1G3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atp6v1c1Q9Z1G3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1c1Q9Z1G3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1c1Q9Z1G3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1c1Q9Z1G3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1c1Q9Z1G3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1c1Q9Z1G3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c1Q9Z1G3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.46■■□□□ 1.19
Atp6v1c1Q9Z1G3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1c1Q9Z1G3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1c1Q9Z1G3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1c1Q9Z1G3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.45■■□□□ 1.18
Atp6v1c1Q9Z1G3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.45■■□□□ 1.18
Atp6v1c1Q9Z1G3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Atp6v1c1Q9Z1G3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1c1Q9Z1G3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.44■■□□□ 1.18
Atp6v1c1Q9Z1G3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1c1Q9Z1G3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c1Q9Z1G3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c1Q9Z1G3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c1Q9Z1G3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c1Q9Z1G3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Atp6v1c1Q9Z1G3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1c1Q9Z1G3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1c1Q9Z1G3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1c1Q9Z1G3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.42■■□□□ 1.18
Atp6v1c1Q9Z1G3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1c1Q9Z1G3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atp6v1c1Q9Z1G3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1c1Q9Z1G3 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.41■■□□□ 1.18
Atp6v1c1Q9Z1G3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Atp6v1c1Q9Z1G3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1c1Q9Z1G3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1c1Q9Z1G3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
Atp6v1c1Q9Z1G3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c1Q9Z1G3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c1Q9Z1G3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c1Q9Z1G3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.37■■□□□ 1.17
Atp6v1c1Q9Z1G3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms