Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.43■■□□□ 1.5
Smarcb1Q9Z0H3 Amer2-203ENSMUST00000225247 2662 ntBASIC24.42■■□□□ 1.5
Smarcb1Q9Z0H3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Smarcb1Q9Z0H3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.39■■□□□ 1.5
Smarcb1Q9Z0H3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smarcb1Q9Z0H3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Gm9806-201ENSMUST00000051080 552 ntBASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Scarna2-201ENSMUST00000157560 414 ntBASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Gm9812-201ENSMUST00000061934 968 ntBASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Gm11687-201ENSMUST00000118911 886 ntBASIC24.35■■□□□ 1.49
Smarcb1Q9Z0H3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Smarcb1Q9Z0H3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.28■■□□□ 1.48
Smarcb1Q9Z0H3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smarcb1Q9Z0H3 Gm16437-201ENSMUST00000025669 507 ntBASIC24.27■■□□□ 1.48
Smarcb1Q9Z0H3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Cap2-205ENSMUST00000225824 1634 ntBASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Smarcb1Q9Z0H3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.16■■□□□ 1.46
Smarcb1Q9Z0H3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smarcb1Q9Z0H3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smarcb1Q9Z0H3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Smarcb1Q9Z0H3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms