Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
KCNE3Q9Y6H6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.65■■□□□ 1.38
KCNE3Q9Y6H6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNE3Q9Y6H6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.65■■□□□ 1.38
KCNE3Q9Y6H6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
KCNE3Q9Y6H6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 LINC01003-201ENST00000564834 1764 ntBASIC23.63■■□□□ 1.37
KCNE3Q9Y6H6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNE3Q9Y6H6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNE3Q9Y6H6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KCNE3Q9Y6H6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNE3Q9Y6H6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.61■■□□□ 1.37
KCNE3Q9Y6H6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNE3Q9Y6H6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNE3Q9Y6H6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNE3Q9Y6H6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNE3Q9Y6H6 DUX4L29-201ENST00000425409 679 ntBASIC23.59■■□□□ 1.37
KCNE3Q9Y6H6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNE3Q9Y6H6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNE3Q9Y6H6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.58■■□□□ 1.37
KCNE3Q9Y6H6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNE3Q9Y6H6 AL121749.1-202ENST00000609313 2153 ntBASIC23.57■■□□□ 1.36
KCNE3Q9Y6H6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNE3Q9Y6H6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNE3Q9Y6H6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNE3Q9Y6H6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNE3Q9Y6H6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNE3Q9Y6H6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
KCNE3Q9Y6H6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNE3Q9Y6H6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNE3Q9Y6H6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNE3Q9Y6H6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNE3Q9Y6H6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
KCNE3Q9Y6H6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KCNE3Q9Y6H6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KCNE3Q9Y6H6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.54■■□□□ 1.36
KCNE3Q9Y6H6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KCNE3Q9Y6H6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNE3Q9Y6H6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNE3Q9Y6H6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
KCNE3Q9Y6H6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.52■■□□□ 1.36
KCNE3Q9Y6H6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNE3Q9Y6H6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.51■■□□□ 1.35
KCNE3Q9Y6H6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNE3Q9Y6H6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNE3Q9Y6H6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KCNE3Q9Y6H6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNE3Q9Y6H6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.5■■□□□ 1.35
KCNE3Q9Y6H6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNE3Q9Y6H6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KCNE3Q9Y6H6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KCNE3Q9Y6H6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNE3Q9Y6H6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNE3Q9Y6H6 AC018358.1-201ENST00000631079 1402 ntBASIC23.48■■□□□ 1.35
KCNE3Q9Y6H6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
KCNE3Q9Y6H6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 AC110285.7-201ENST00000624417 1536 ntBASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
KCNE3Q9Y6H6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
KCNE3Q9Y6H6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
KCNE3Q9Y6H6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNE3Q9Y6H6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.44■■□□□ 1.34
KCNE3Q9Y6H6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.44■■□□□ 1.34
KCNE3Q9Y6H6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.44■■□□□ 1.34
KCNE3Q9Y6H6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNE3Q9Y6H6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNE3Q9Y6H6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms