Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CYP46A1Q9Y6A2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CYP46A1Q9Y6A2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.14■■■□□ 2.41
CYP46A1Q9Y6A2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CYP46A1Q9Y6A2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CYP46A1Q9Y6A2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.12■■■□□ 2.41
CYP46A1Q9Y6A2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CYP46A1Q9Y6A2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CYP46A1Q9Y6A2 AL121749.1-202ENST00000609313 2153 ntBASIC30.11■■■□□ 2.41
CYP46A1Q9Y6A2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CYP46A1Q9Y6A2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CYP46A1Q9Y6A2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.1■■■□□ 2.41
CYP46A1Q9Y6A2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.09■■■□□ 2.41
CYP46A1Q9Y6A2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.09■■■□□ 2.41
CYP46A1Q9Y6A2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.09■■■□□ 2.41
CYP46A1Q9Y6A2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.09■■■□□ 2.41
CYP46A1Q9Y6A2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.08■■■□□ 2.41
CYP46A1Q9Y6A2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.08■■■□□ 2.41
CYP46A1Q9Y6A2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CYP46A1Q9Y6A2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CYP46A1Q9Y6A2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CYP46A1Q9Y6A2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP46A1Q9Y6A2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP46A1Q9Y6A2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP46A1Q9Y6A2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP46A1Q9Y6A2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CYP46A1Q9Y6A2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.05■■■□□ 2.4
CYP46A1Q9Y6A2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CYP46A1Q9Y6A2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CYP46A1Q9Y6A2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP46A1Q9Y6A2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CYP46A1Q9Y6A2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CYP46A1Q9Y6A2 AC021231.2-201ENST00000594613 730 ntBASIC30.01■■■□□ 2.39
CYP46A1Q9Y6A2 AC018358.1-201ENST00000631079 1402 ntBASIC30.01■■■□□ 2.39
CYP46A1Q9Y6A2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CYP46A1Q9Y6A2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.01■■■□□ 2.39
CYP46A1Q9Y6A2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30■■■□□ 2.39
CYP46A1Q9Y6A2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
CYP46A1Q9Y6A2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CYP46A1Q9Y6A2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CYP46A1Q9Y6A2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CYP46A1Q9Y6A2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CYP46A1Q9Y6A2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 DUX4L29-201ENST00000425409 679 ntBASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP46A1Q9Y6A2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 RPS2P35-201ENST00000443417 897 ntBASIC29.97■■■□□ 2.39
CYP46A1Q9Y6A2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CYP46A1Q9Y6A2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CYP46A1Q9Y6A2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.96■■■□□ 2.39
CYP46A1Q9Y6A2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CYP46A1Q9Y6A2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CYP46A1Q9Y6A2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CYP46A1Q9Y6A2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CYP46A1Q9Y6A2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CYP46A1Q9Y6A2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
CYP46A1Q9Y6A2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.94■■■□□ 2.38
CYP46A1Q9Y6A2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CYP46A1Q9Y6A2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CYP46A1Q9Y6A2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CYP46A1Q9Y6A2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
CYP46A1Q9Y6A2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CYP46A1Q9Y6A2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CYP46A1Q9Y6A2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CYP46A1Q9Y6A2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CYP46A1Q9Y6A2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CYP46A1Q9Y6A2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.91■■■□□ 2.38
CYP46A1Q9Y6A2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CYP46A1Q9Y6A2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CYP46A1Q9Y6A2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
CYP46A1Q9Y6A2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
CYP46A1Q9Y6A2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CYP46A1Q9Y6A2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CYP46A1Q9Y6A2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CYP46A1Q9Y6A2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CYP46A1Q9Y6A2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.88■■■□□ 2.37
CYP46A1Q9Y6A2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CYP46A1Q9Y6A2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms