Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
HS3ST3A1Q9Y663 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HS3ST3A1Q9Y663 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.26■■□□□ 1.63
HS3ST3A1Q9Y663 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HS3ST3A1Q9Y663 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.26■■□□□ 1.63
HS3ST3A1Q9Y663 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
HS3ST3A1Q9Y663 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HS3ST3A1Q9Y663 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HS3ST3A1Q9Y663 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
HS3ST3A1Q9Y663 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.24■■□□□ 1.63
HS3ST3A1Q9Y663 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.24■■□□□ 1.63
HS3ST3A1Q9Y663 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HS3ST3A1Q9Y663 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HS3ST3A1Q9Y663 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HS3ST3A1Q9Y663 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.23■■□□□ 1.63
HS3ST3A1Q9Y663 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HS3ST3A1Q9Y663 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HS3ST3A1Q9Y663 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.22■■□□□ 1.63
HS3ST3A1Q9Y663 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HS3ST3A1Q9Y663 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
HS3ST3A1Q9Y663 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
HS3ST3A1Q9Y663 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.2■■□□□ 1.62
HS3ST3A1Q9Y663 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HS3ST3A1Q9Y663 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HS3ST3A1Q9Y663 MIR219A2-201ENST00000608502 1504 ntBASIC25.19■■□□□ 1.62
HS3ST3A1Q9Y663 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
HS3ST3A1Q9Y663 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HS3ST3A1Q9Y663 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HS3ST3A1Q9Y663 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
HS3ST3A1Q9Y663 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HS3ST3A1Q9Y663 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
HS3ST3A1Q9Y663 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HS3ST3A1Q9Y663 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.17■■□□□ 1.62
HS3ST3A1Q9Y663 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
HS3ST3A1Q9Y663 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.17■■□□□ 1.62
HS3ST3A1Q9Y663 ABHD17AP5-201ENST00000580133 923 ntBASIC25.16■■□□□ 1.62
HS3ST3A1Q9Y663 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HS3ST3A1Q9Y663 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HS3ST3A1Q9Y663 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HS3ST3A1Q9Y663 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.14■■□□□ 1.61
HS3ST3A1Q9Y663 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
HS3ST3A1Q9Y663 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.13■■□□□ 1.61
HS3ST3A1Q9Y663 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HS3ST3A1Q9Y663 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
HS3ST3A1Q9Y663 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HS3ST3A1Q9Y663 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
HS3ST3A1Q9Y663 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HS3ST3A1Q9Y663 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
HS3ST3A1Q9Y663 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.11■■□□□ 1.61
HS3ST3A1Q9Y663 AC060814.1-201ENST00000554326 538 ntBASIC25.11■■□□□ 1.61
HS3ST3A1Q9Y663 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.11■■□□□ 1.61
HS3ST3A1Q9Y663 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HS3ST3A1Q9Y663 AC100797.4-201ENST00000631653 1827 ntBASIC25.1■■□□□ 1.61
HS3ST3A1Q9Y663 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HS3ST3A1Q9Y663 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HS3ST3A1Q9Y663 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.08■■□□□ 1.61
HS3ST3A1Q9Y663 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.08■■□□□ 1.61
HS3ST3A1Q9Y663 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
HS3ST3A1Q9Y663 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HS3ST3A1Q9Y663 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HS3ST3A1Q9Y663 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
HS3ST3A1Q9Y663 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HS3ST3A1Q9Y663 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.05■■□□□ 1.6
HS3ST3A1Q9Y663 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 AC126177.7-201ENST00000547904 679 ntBASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
HS3ST3A1Q9Y663 AL139393.2-201ENST00000608721 2025 ntBASIC25.03■■□□□ 1.6
HS3ST3A1Q9Y663 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
HS3ST3A1Q9Y663 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HS3ST3A1Q9Y663 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
HS3ST3A1Q9Y663 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HS3ST3A1Q9Y663 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HS3ST3A1Q9Y663 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HS3ST3A1Q9Y663 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.02■■□□□ 1.6
HS3ST3A1Q9Y663 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HS3ST3A1Q9Y663 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HS3ST3A1Q9Y663 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HS3ST3A1Q9Y663 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HS3ST3A1Q9Y663 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 AC092296.2-201ENST00000589470 999 ntBASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
HS3ST3A1Q9Y663 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms