Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.26■□□□□ 0.99
UBQLN2Q9UHD9 AL031258.1-201ENST00000623562 325 ntBASIC21.26■□□□□ 0.99
UBQLN2Q9UHD9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN2Q9UHD9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN2Q9UHD9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN2Q9UHD9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN2Q9UHD9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN2Q9UHD9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN2Q9UHD9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBQLN2Q9UHD9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN2Q9UHD9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
UBQLN2Q9UHD9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN2Q9UHD9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
UBQLN2Q9UHD9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
UBQLN2Q9UHD9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN2Q9UHD9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
UBQLN2Q9UHD9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN2Q9UHD9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
UBQLN2Q9UHD9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.18■□□□□ 0.98
UBQLN2Q9UHD9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN2Q9UHD9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
UBQLN2Q9UHD9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.17■□□□□ 0.98
UBQLN2Q9UHD9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
UBQLN2Q9UHD9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN2Q9UHD9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN2Q9UHD9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN2Q9UHD9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.14■□□□□ 0.98
UBQLN2Q9UHD9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UBQLN2Q9UHD9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN2Q9UHD9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN2Q9UHD9 AC145676.1-201ENST00000514988 2004 ntBASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
UBQLN2Q9UHD9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN2Q9UHD9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN2Q9UHD9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN2Q9UHD9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN2Q9UHD9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN2Q9UHD9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN2Q9UHD9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBQLN2Q9UHD9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN2Q9UHD9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBQLN2Q9UHD9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN2Q9UHD9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.08■□□□□ 0.97
UBQLN2Q9UHD9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN2Q9UHD9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN2Q9UHD9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN2Q9UHD9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
UBQLN2Q9UHD9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN2Q9UHD9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN2Q9UHD9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 AC133561.1-201ENST00000568600 2415 ntBASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN2Q9UHD9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms