Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00474Q9P2X8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00474Q9P2X8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00474Q9P2X8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00474Q9P2X8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00474Q9P2X8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00474Q9P2X8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00474Q9P2X8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC00474Q9P2X8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00474Q9P2X8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00474Q9P2X8 WHAMMP2-203ENST00000563942 1603 ntBASIC16.3■□□□□ 0.2
LINC00474Q9P2X8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00474Q9P2X8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00474Q9P2X8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00474Q9P2X8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00474Q9P2X8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00474Q9P2X8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC00474Q9P2X8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00474Q9P2X8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00474Q9P2X8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 DUX4L11-201ENST00000611504 1267 ntBASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 DUX4L12-201ENST00000614593 1267 ntBASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 DUX4L14-201ENST00000621227 1267 ntBASIC16.27■□□□□ 0.2
LINC00474Q9P2X8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00474Q9P2X8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L13-201ENST00000554103 1267 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L15-201ENST00000611059 1267 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L23-201ENST00000615195 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L24-201ENST00000617576 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L22-201ENST00000618238 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L20-201ENST00000619712 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L21-201ENST00000622058 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L10-201ENST00000622460 1267 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 DUX4L25-201ENST00000624915 1269 ntBASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00474Q9P2X8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00474Q9P2X8 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00474Q9P2X8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00474Q9P2X8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00474Q9P2X8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00474Q9P2X8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00474Q9P2X8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00474Q9P2X8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00474Q9P2X8 AC100797.4-201ENST00000631653 1827 ntBASIC16.23■□□□□ 0.19
LINC00474Q9P2X8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00474Q9P2X8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 AC008813.1-201ENST00000536597 885 ntBASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 MIR7108-201ENST00000614319 87 ntBASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 AC110285.7-201ENST00000624417 1536 ntBASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00474Q9P2X8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00474Q9P2X8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00474Q9P2X8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LINC00474Q9P2X8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00474Q9P2X8 AP002414.2-202ENST00000590929 1450 ntBASIC16.21■□□□□ 0.19
LINC00474Q9P2X8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00474Q9P2X8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms