Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.32■■■□□ 2.28
RNF146Q9NTX7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.32■■■□□ 2.28
RNF146Q9NTX7 AC022413.1-201ENST00000624602 984 ntBASIC29.32■■■□□ 2.28
RNF146Q9NTX7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
RNF146Q9NTX7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF146Q9NTX7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.31■■■□□ 2.28
RNF146Q9NTX7 AC148477.6-201ENST00000623746 465 ntBASIC29.31■■■□□ 2.28
RNF146Q9NTX7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF146Q9NTX7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF146Q9NTX7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF146Q9NTX7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RNF146Q9NTX7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.29■■■□□ 2.28
RNF146Q9NTX7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF146Q9NTX7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF146Q9NTX7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF146Q9NTX7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
RNF146Q9NTX7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.28■■■□□ 2.28
RNF146Q9NTX7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF146Q9NTX7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF146Q9NTX7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RNF146Q9NTX7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.27■■■□□ 2.28
RNF146Q9NTX7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
RNF146Q9NTX7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
RNF146Q9NTX7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
RNF146Q9NTX7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.26■■■□□ 2.27
RNF146Q9NTX7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF146Q9NTX7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RNF146Q9NTX7 AP004833.2-201ENST00000532228 1454 ntBASIC29.24■■■□□ 2.27
RNF146Q9NTX7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.24■■■□□ 2.27
RNF146Q9NTX7 ABHD17AP5-201ENST00000580133 923 ntBASIC29.24■■■□□ 2.27
RNF146Q9NTX7 MIR219A2-201ENST00000608502 1504 ntBASIC29.24■■■□□ 2.27
RNF146Q9NTX7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RNF146Q9NTX7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RNF146Q9NTX7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RNF146Q9NTX7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RNF146Q9NTX7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RNF146Q9NTX7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
RNF146Q9NTX7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.21■■■□□ 2.27
RNF146Q9NTX7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
RNF146Q9NTX7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RNF146Q9NTX7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RNF146Q9NTX7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RNF146Q9NTX7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
RNF146Q9NTX7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RNF146Q9NTX7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RNF146Q9NTX7 AC100797.4-201ENST00000631653 1827 ntBASIC29.16■■■□□ 2.26
RNF146Q9NTX7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF146Q9NTX7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF146Q9NTX7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.16■■■□□ 2.26
RNF146Q9NTX7 AC060814.1-201ENST00000554326 538 ntBASIC29.16■■■□□ 2.26
RNF146Q9NTX7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
RNF146Q9NTX7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF146Q9NTX7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RNF146Q9NTX7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
RNF146Q9NTX7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.14■■■□□ 2.26
RNF146Q9NTX7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
RNF146Q9NTX7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF146Q9NTX7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
RNF146Q9NTX7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RNF146Q9NTX7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
RNF146Q9NTX7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RNF146Q9NTX7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.1■■■□□ 2.25
RNF146Q9NTX7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
RNF146Q9NTX7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF146Q9NTX7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.1■■■□□ 2.25
RNF146Q9NTX7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.08■■■□□ 2.25
RNF146Q9NTX7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RNF146Q9NTX7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF146Q9NTX7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.06■■■□□ 2.24
RNF146Q9NTX7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF146Q9NTX7 AL139393.2-201ENST00000608721 2025 ntBASIC29.05■■■□□ 2.24
RNF146Q9NTX7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
RNF146Q9NTX7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.04■■■□□ 2.24
RNF146Q9NTX7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RNF146Q9NTX7 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.03■■■□□ 2.24
RNF146Q9NTX7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RNF146Q9NTX7 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.03■■■□□ 2.24
RNF146Q9NTX7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.02■■■□□ 2.24
RNF146Q9NTX7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
RNF146Q9NTX7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RNF146Q9NTX7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RNF146Q9NTX7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.01■■■□□ 2.23
RNF146Q9NTX7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.01■■■□□ 2.23
RNF146Q9NTX7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29■■■□□ 2.23
RNF146Q9NTX7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29■■■□□ 2.23
RNF146Q9NTX7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29■■■□□ 2.23
RNF146Q9NTX7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29■■■□□ 2.23
RNF146Q9NTX7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RNF146Q9NTX7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29■■■□□ 2.23
RNF146Q9NTX7 AC092296.2-201ENST00000589470 999 ntBASIC29■■■□□ 2.23
RNF146Q9NTX7 NTF6A-201ENST00000591175 560 ntBASIC29■■■□□ 2.23
RNF146Q9NTX7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29■■■□□ 2.23
RNF146Q9NTX7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.99■■■□□ 2.23
RNF146Q9NTX7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RNF146Q9NTX7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms