Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 MIR762-201ENST00000390236 83 ntBASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC42SE2Q9NRR3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 AC018358.1-201ENST00000631079 1402 ntBASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 AC135983.2-203ENST00000454486 1613 ntBASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42SE2Q9NRR3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 AL449106.1-201ENST00000608517 1980 ntBASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 AC005559.1-201ENST00000589661 871 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms