Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rcl1Q9JJT0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Rcl1Q9JJT0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.41■□□□□ 0.7
Rcl1Q9JJT0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rcl1Q9JJT0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rcl1Q9JJT0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rcl1Q9JJT0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rcl1Q9JJT0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rcl1Q9JJT0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rcl1Q9JJT0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rcl1Q9JJT0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rcl1Q9JJT0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rcl1Q9JJT0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.38■□□□□ 0.69
Rcl1Q9JJT0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rcl1Q9JJT0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rcl1Q9JJT0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rcl1Q9JJT0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rcl1Q9JJT0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Rcl1Q9JJT0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rcl1Q9JJT0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rcl1Q9JJT0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rcl1Q9JJT0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rcl1Q9JJT0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.33■□□□□ 0.69
Rcl1Q9JJT0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rcl1Q9JJT0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rcl1Q9JJT0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rcl1Q9JJT0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rcl1Q9JJT0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rcl1Q9JJT0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rcl1Q9JJT0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rcl1Q9JJT0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rcl1Q9JJT0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rcl1Q9JJT0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rcl1Q9JJT0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rcl1Q9JJT0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rcl1Q9JJT0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Rcl1Q9JJT0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rcl1Q9JJT0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rcl1Q9JJT0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rcl1Q9JJT0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rcl1Q9JJT0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rcl1Q9JJT0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.27■□□□□ 0.68
Rcl1Q9JJT0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rcl1Q9JJT0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rcl1Q9JJT0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rcl1Q9JJT0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.26■□□□□ 0.67
Rcl1Q9JJT0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rcl1Q9JJT0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rcl1Q9JJT0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rcl1Q9JJT0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rcl1Q9JJT0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rcl1Q9JJT0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rcl1Q9JJT0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.24■□□□□ 0.67
Rcl1Q9JJT0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.24■□□□□ 0.67
Rcl1Q9JJT0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rcl1Q9JJT0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rcl1Q9JJT0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rcl1Q9JJT0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms