Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.67■■■□□ 2.18
ZSWIM4Q9H7M6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ZSWIM4Q9H7M6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.67■■■□□ 2.18
ZSWIM4Q9H7M6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.67■■■□□ 2.18
ZSWIM4Q9H7M6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.66■■■□□ 2.18
ZSWIM4Q9H7M6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ZSWIM4Q9H7M6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.66■■■□□ 2.18
ZSWIM4Q9H7M6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ZSWIM4Q9H7M6 AC016575.1-201ENST00000607026 382 ntBASIC28.65■■■□□ 2.18
ZSWIM4Q9H7M6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.64■■■□□ 2.18
ZSWIM4Q9H7M6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZSWIM4Q9H7M6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.64■■■□□ 2.18
ZSWIM4Q9H7M6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.64■■■□□ 2.17
ZSWIM4Q9H7M6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.62■■■□□ 2.17
ZSWIM4Q9H7M6 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.62■■■□□ 2.17
ZSWIM4Q9H7M6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 HLA-V-202ENST00000446817 847 ntBASIC28.61■■■□□ 2.17
ZSWIM4Q9H7M6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ZSWIM4Q9H7M6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.6■■■□□ 2.17
ZSWIM4Q9H7M6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.6■■■□□ 2.17
ZSWIM4Q9H7M6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ZSWIM4Q9H7M6 AC100797.4-201ENST00000631653 1827 ntBASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.59■■■□□ 2.17
ZSWIM4Q9H7M6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ZSWIM4Q9H7M6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.57■■■□□ 2.16
ZSWIM4Q9H7M6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ZSWIM4Q9H7M6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.57■■■□□ 2.16
ZSWIM4Q9H7M6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.57■■■□□ 2.16
ZSWIM4Q9H7M6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.57■■■□□ 2.16
ZSWIM4Q9H7M6 MIR639-201ENST00000384974 98 ntBASIC28.56■■■□□ 2.16
ZSWIM4Q9H7M6 AC110285.7-201ENST00000624417 1536 ntBASIC28.56■■■□□ 2.16
ZSWIM4Q9H7M6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ZSWIM4Q9H7M6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ZSWIM4Q9H7M6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZSWIM4Q9H7M6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZSWIM4Q9H7M6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
ZSWIM4Q9H7M6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ZSWIM4Q9H7M6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ZSWIM4Q9H7M6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
ZSWIM4Q9H7M6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
ZSWIM4Q9H7M6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ZSWIM4Q9H7M6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.53■■■□□ 2.16
ZSWIM4Q9H7M6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
ZSWIM4Q9H7M6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
ZSWIM4Q9H7M6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.52■■■□□ 2.16
ZSWIM4Q9H7M6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
ZSWIM4Q9H7M6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ZSWIM4Q9H7M6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ZSWIM4Q9H7M6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ZSWIM4Q9H7M6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ZSWIM4Q9H7M6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
ZSWIM4Q9H7M6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ZSWIM4Q9H7M6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.49■■■□□ 2.15
ZSWIM4Q9H7M6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.48■■■□□ 2.15
ZSWIM4Q9H7M6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.48■■■□□ 2.15
ZSWIM4Q9H7M6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.48■■■□□ 2.15
ZSWIM4Q9H7M6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZSWIM4Q9H7M6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.46■■■□□ 2.15
ZSWIM4Q9H7M6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.46■■■□□ 2.15
ZSWIM4Q9H7M6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZSWIM4Q9H7M6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
ZSWIM4Q9H7M6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
ZSWIM4Q9H7M6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.45■■■□□ 2.14
ZSWIM4Q9H7M6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ZSWIM4Q9H7M6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
ZSWIM4Q9H7M6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZSWIM4Q9H7M6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
ZSWIM4Q9H7M6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
ZSWIM4Q9H7M6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZSWIM4Q9H7M6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZSWIM4Q9H7M6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZSWIM4Q9H7M6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
ZSWIM4Q9H7M6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ZSWIM4Q9H7M6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZSWIM4Q9H7M6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZSWIM4Q9H7M6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 AC008813.1-201ENST00000536597 885 ntBASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 MIR4449-201ENST00000578365 66 ntBASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZSWIM4Q9H7M6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.4■■■□□ 2.14
ZSWIM4Q9H7M6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ZSWIM4Q9H7M6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms