Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 DUX4L11-201ENST00000611504 1267 ntBASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 DUX4L12-201ENST00000614593 1267 ntBASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 LINC01971-201ENST00000617888 1048 ntBASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 DUX4L14-201ENST00000621227 1267 ntBASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SUDS3Q9H7L9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SUDS3Q9H7L9 AC135983.2-203ENST00000454486 1613 ntBASIC25.68■■□□□ 1.7
SUDS3Q9H7L9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SUDS3Q9H7L9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SUDS3Q9H7L9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SUDS3Q9H7L9 AC135731.1-201ENST00000569415 2548 ntBASIC25.67■■□□□ 1.7
SUDS3Q9H7L9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.67■■□□□ 1.7
SUDS3Q9H7L9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SUDS3Q9H7L9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 WHAMMP2-203ENST00000563942 1603 ntBASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 LINC00273-201ENST00000539813 1452 ntBASIC25.66■■□□□ 1.7
SUDS3Q9H7L9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SUDS3Q9H7L9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
SUDS3Q9H7L9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SUDS3Q9H7L9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.64■■□□□ 1.7
SUDS3Q9H7L9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 AC016575.1-201ENST00000607026 382 ntBASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SUDS3Q9H7L9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
SUDS3Q9H7L9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SUDS3Q9H7L9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SUDS3Q9H7L9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SUDS3Q9H7L9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SUDS3Q9H7L9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.61■■□□□ 1.69
SUDS3Q9H7L9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SUDS3Q9H7L9 AC142086.6-201ENST00000621154 1765 ntBASIC25.6■■□□□ 1.69
SUDS3Q9H7L9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.6■■□□□ 1.69
SUDS3Q9H7L9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SUDS3Q9H7L9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SUDS3Q9H7L9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 MIR3648-2-201ENST00000581792 180 ntBASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 MIR3648-1-201ENST00000615959 180 ntBASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 CR559946.2-201ENST00000623684 991 ntBASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.59■■□□□ 1.69
SUDS3Q9H7L9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.58■■□□□ 1.69
SUDS3Q9H7L9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SUDS3Q9H7L9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
SUDS3Q9H7L9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SUDS3Q9H7L9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SUDS3Q9H7L9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SUDS3Q9H7L9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SUDS3Q9H7L9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SUDS3Q9H7L9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.56■■□□□ 1.68
SUDS3Q9H7L9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SUDS3Q9H7L9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SUDS3Q9H7L9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.55■■□□□ 1.68
SUDS3Q9H7L9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SUDS3Q9H7L9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SUDS3Q9H7L9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SUDS3Q9H7L9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SUDS3Q9H7L9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.52■■□□□ 1.68
SUDS3Q9H7L9 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.52■■□□□ 1.68
SUDS3Q9H7L9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SUDS3Q9H7L9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SUDS3Q9H7L9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SUDS3Q9H7L9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SUDS3Q9H7L9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.5■■□□□ 1.67
SUDS3Q9H7L9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
SUDS3Q9H7L9 DUX4L13-201ENST00000554103 1267 ntBASIC25.5■■□□□ 1.67
SUDS3Q9H7L9 DUX4L15-201ENST00000611059 1267 ntBASIC25.5■■□□□ 1.67
SUDS3Q9H7L9 DUX4L23-201ENST00000615195 1269 ntBASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms