Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.2■■□□□ 1.14
CXXC4Q9H2H0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 AC022413.1-201ENST00000624602 984 ntBASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CXXC4Q9H2H0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.18■■□□□ 1.14
CXXC4Q9H2H0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CXXC4Q9H2H0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CXXC4Q9H2H0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CXXC4Q9H2H0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CXXC4Q9H2H0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CXXC4Q9H2H0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.16■■□□□ 1.14
CXXC4Q9H2H0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.16■■□□□ 1.14
CXXC4Q9H2H0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CXXC4Q9H2H0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 ABCB10P3-201ENST00000561950 2166 ntBASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.15■■□□□ 1.14
CXXC4Q9H2H0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CXXC4Q9H2H0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CXXC4Q9H2H0 AL033527.3-201ENST00000566366 1196 ntBASIC22.14■■□□□ 1.13
CXXC4Q9H2H0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CXXC4Q9H2H0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CXXC4Q9H2H0 AC008813.1-201ENST00000536597 885 ntBASIC22.13■■□□□ 1.13
CXXC4Q9H2H0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CXXC4Q9H2H0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CXXC4Q9H2H0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.12■■□□□ 1.13
CXXC4Q9H2H0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.12■■□□□ 1.13
CXXC4Q9H2H0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CXXC4Q9H2H0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CXXC4Q9H2H0 AC127502.1-201ENST00000399971 1502 ntBASIC22.11■■□□□ 1.13
CXXC4Q9H2H0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CXXC4Q9H2H0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CXXC4Q9H2H0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CXXC4Q9H2H0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CXXC4Q9H2H0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.1■■□□□ 1.13
CXXC4Q9H2H0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CXXC4Q9H2H0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC4Q9H2H0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC4Q9H2H0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.09■■□□□ 1.13
CXXC4Q9H2H0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CXXC4Q9H2H0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CXXC4Q9H2H0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.08■■□□□ 1.12
CXXC4Q9H2H0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CXXC4Q9H2H0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC4Q9H2H0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC4Q9H2H0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
CXXC4Q9H2H0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CXXC4Q9H2H0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 LINC00273-201ENST00000539813 1452 ntBASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 AL139393.2-201ENST00000608721 2025 ntBASIC22.06■■□□□ 1.12
CXXC4Q9H2H0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
CXXC4Q9H2H0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC4Q9H2H0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC4Q9H2H0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.04■■□□□ 1.12
CXXC4Q9H2H0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
CXXC4Q9H2H0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CXXC4Q9H2H0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CXXC4Q9H2H0 U85056.1-201ENST00000616429 682 ntBASIC22.03■■□□□ 1.12
CXXC4Q9H2H0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
CXXC4Q9H2H0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
CXXC4Q9H2H0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CXXC4Q9H2H0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.02■■□□□ 1.12
CXXC4Q9H2H0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CXXC4Q9H2H0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.01■■□□□ 1.11
CXXC4Q9H2H0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CXXC4Q9H2H0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CXXC4Q9H2H0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CXXC4Q9H2H0 TSPY13P-201ENST00000338964 914 ntBASIC22■■□□□ 1.11
CXXC4Q9H2H0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22■■□□□ 1.11
CXXC4Q9H2H0 AP004833.2-201ENST00000532228 1454 ntBASIC22■■□□□ 1.11
CXXC4Q9H2H0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22■■□□□ 1.11
CXXC4Q9H2H0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22■■□□□ 1.11
CXXC4Q9H2H0 AC139426.1-201ENST00000568218 2529 ntBASIC22■■□□□ 1.11
CXXC4Q9H2H0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CXXC4Q9H2H0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CXXC4Q9H2H0 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.99■■□□□ 1.11
CXXC4Q9H2H0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CXXC4Q9H2H0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms