Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 AC044849.2-201ENST00000606596 710 ntBASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
NUCKS1Q9H1E3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.45■■□□□ 1.99
NUCKS1Q9H1E3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NUCKS1Q9H1E3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
NUCKS1Q9H1E3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 AC108673.1-201ENST00000510422 1159 ntBASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 AC135983.2-203ENST00000454486 1613 ntBASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.39■■□□□ 1.98
NUCKS1Q9H1E3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 AC018358.1-201ENST00000631079 1402 ntBASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 MIR6090-201ENST00000622481 60 ntBASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 LINC00273-201ENST00000539813 1452 ntBASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 WHAMMP2-203ENST00000563942 1603 ntBASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.27■■□□□ 1.96
NUCKS1Q9H1E3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.27■■□□□ 1.96
NUCKS1Q9H1E3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
NUCKS1Q9H1E3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.25■■□□□ 1.95
NUCKS1Q9H1E3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NUCKS1Q9H1E3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms