Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYSTM1Q9H1C7 AL139393.2-201ENST00000608721 2025 ntBASIC15.21■□□□□ 0.02
CYSTM1Q9H1C7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
CYSTM1Q9H1C7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYSTM1Q9H1C7 AC120057.4-201ENST00000624722 1615 ntBASIC15.2■□□□□ 0.02
CYSTM1Q9H1C7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYSTM1Q9H1C7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYSTM1Q9H1C7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYSTM1Q9H1C7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYSTM1Q9H1C7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CYSTM1Q9H1C7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CYSTM1Q9H1C7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CYSTM1Q9H1C7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CYSTM1Q9H1C7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CYSTM1Q9H1C7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CYSTM1Q9H1C7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CYSTM1Q9H1C7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 RNF165-205ENST00000588679 2904 ntBASIC15.15■□□□□ 0.02
CYSTM1Q9H1C7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 AC068473.5-201ENST00000616428 2072 ntBASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CYSTM1Q9H1C7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYSTM1Q9H1C7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYSTM1Q9H1C7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYSTM1Q9H1C7 AC091060.1-201ENST00000623524 1766 ntBASIC15.13■□□□□ 0.01
CYSTM1Q9H1C7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CYSTM1Q9H1C7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYSTM1Q9H1C7 SLC25A24-204ENST00000569674 2357 ntBASIC15.12■□□□□ 0.01
CYSTM1Q9H1C7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.11■□□□□ 0.01
CYSTM1Q9H1C7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYSTM1Q9H1C7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYSTM1Q9H1C7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CYSTM1Q9H1C7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYSTM1Q9H1C7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CYSTM1Q9H1C7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CYSTM1Q9H1C7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CYSTM1Q9H1C7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC15.08■□□□□ 0.01
CYSTM1Q9H1C7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CYSTM1Q9H1C7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CYSTM1Q9H1C7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CYSTM1Q9H1C7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CYSTM1Q9H1C7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CYSTM1Q9H1C7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.08■□□□□ 0
CYSTM1Q9H1C7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CYSTM1Q9H1C7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CYSTM1Q9H1C7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.06■□□□□ 0
CYSTM1Q9H1C7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.06■□□□□ 0
CYSTM1Q9H1C7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
CYSTM1Q9H1C7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CYSTM1Q9H1C7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CYSTM1Q9H1C7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CYSTM1Q9H1C7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.05■□□□□ -0
CYSTM1Q9H1C7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CYSTM1Q9H1C7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.05■□□□□ -0
CYSTM1Q9H1C7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.05■□□□□ -0
CYSTM1Q9H1C7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CYSTM1Q9H1C7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CYSTM1Q9H1C7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CYSTM1Q9H1C7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CYSTM1Q9H1C7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC15.04■□□□□ -0
CYSTM1Q9H1C7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CYSTM1Q9H1C7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 1074.1 ms