Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Tlnrd1Q9ERE8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlnrd1Q9ERE8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlnrd1Q9ERE8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlnrd1Q9ERE8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlnrd1Q9ERE8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlnrd1Q9ERE8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlnrd1Q9ERE8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tlnrd1Q9ERE8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlnrd1Q9ERE8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms