Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Nkx2-4Q9EQM3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
Nkx2-4Q9EQM3 Gm15546-201ENSMUST00000122095 826 ntBASIC24.58■■□□□ 1.53
Nkx2-4Q9EQM3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Nkx2-4Q9EQM3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.56■■□□□ 1.52
Nkx2-4Q9EQM3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Nkx2-4Q9EQM3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Nkx2-4Q9EQM3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.56■■□□□ 1.52
Nkx2-4Q9EQM3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.54■■□□□ 1.52
Nkx2-4Q9EQM3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Nkx2-4Q9EQM3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Nkx2-4Q9EQM3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Nkx2-4Q9EQM3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nkx2-4Q9EQM3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Nkx2-4Q9EQM3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nkx2-4Q9EQM3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Nkx2-4Q9EQM3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.51■■□□□ 1.51
Nkx2-4Q9EQM3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Nkx2-4Q9EQM3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nkx2-4Q9EQM3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.5■■□□□ 1.51
Nkx2-4Q9EQM3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Nkx2-4Q9EQM3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nkx2-4Q9EQM3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.49■■□□□ 1.51
Nkx2-4Q9EQM3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Nkx2-4Q9EQM3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.49■■□□□ 1.51
Nkx2-4Q9EQM3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Nkx2-4Q9EQM3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Nkx2-4Q9EQM3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Nkx2-4Q9EQM3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Nkx2-4Q9EQM3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nkx2-4Q9EQM3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nkx2-4Q9EQM3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.46■■□□□ 1.51
Nkx2-4Q9EQM3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.45■■□□□ 1.5
Nkx2-4Q9EQM3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Nkx2-4Q9EQM3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Nkx2-4Q9EQM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Nkx2-4Q9EQM3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Nkx2-4Q9EQM3 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.43■■□□□ 1.5
Nkx2-4Q9EQM3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.43■■□□□ 1.5
Nkx2-4Q9EQM3 Gm9812-201ENSMUST00000061934 968 ntBASIC24.43■■□□□ 1.5
Nkx2-4Q9EQM3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Nkx2-4Q9EQM3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.42■■□□□ 1.5
Nkx2-4Q9EQM3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Nkx2-4Q9EQM3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.41■■□□□ 1.5
Nkx2-4Q9EQM3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Nkx2-4Q9EQM3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nkx2-4Q9EQM3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Nkx2-4Q9EQM3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nkx2-4Q9EQM3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Nkx2-4Q9EQM3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Nkx2-4Q9EQM3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Nkx2-4Q9EQM3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Nkx2-4Q9EQM3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.38■■□□□ 1.49
Nkx2-4Q9EQM3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.37■■□□□ 1.49
Nkx2-4Q9EQM3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Nkx2-4Q9EQM3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx2-4Q9EQM3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Nkx2-4Q9EQM3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Nkx2-4Q9EQM3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Nkx2-4Q9EQM3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Nkx2-4Q9EQM3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Nkx2-4Q9EQM3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Nkx2-4Q9EQM3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.34■■□□□ 1.49
Nkx2-4Q9EQM3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Nkx2-4Q9EQM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Nkx2-4Q9EQM3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Nkx2-4Q9EQM3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.32■■□□□ 1.48
Nkx2-4Q9EQM3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nkx2-4Q9EQM3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nkx2-4Q9EQM3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nkx2-4Q9EQM3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.29■■□□□ 1.48
Nkx2-4Q9EQM3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Nkx2-4Q9EQM3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Nkx2-4Q9EQM3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.28■■□□□ 1.48
Nkx2-4Q9EQM3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Nkx2-4Q9EQM3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms