Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmg20aQ9DC33 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.14■□□□□ 0.98
Hmg20aQ9DC33 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmg20aQ9DC33 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Hmg20aQ9DC33 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.14■□□□□ 0.98
Hmg20aQ9DC33 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmg20aQ9DC33 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20aQ9DC33 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.14■□□□□ 0.97
Hmg20aQ9DC33 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20aQ9DC33 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20aQ9DC33 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.13■□□□□ 0.97
Hmg20aQ9DC33 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20aQ9DC33 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hmg20aQ9DC33 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20aQ9DC33 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20aQ9DC33 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20aQ9DC33 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20aQ9DC33 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Hmg20aQ9DC33 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmg20aQ9DC33 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20aQ9DC33 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20aQ9DC33 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20aQ9DC33 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20aQ9DC33 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20aQ9DC33 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Hmg20aQ9DC33 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.97
Hmg20aQ9DC33 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Hmg20aQ9DC33 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmg20aQ9DC33 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Hmg20aQ9DC33 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Hmg20aQ9DC33 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20aQ9DC33 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hmg20aQ9DC33 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20aQ9DC33 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Peli2-204ENSMUST00000226513 1320 ntBASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20aQ9DC33 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hmg20aQ9DC33 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20aQ9DC33 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20aQ9DC33 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20aQ9DC33 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20aQ9DC33 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hmg20aQ9DC33 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20aQ9DC33 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20aQ9DC33 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20aQ9DC33 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20aQ9DC33 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20aQ9DC33 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20aQ9DC33 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Hmg20aQ9DC33 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmg20aQ9DC33 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20aQ9DC33 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Hmg20aQ9DC33 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21■□□□□ 0.95
Hmg20aQ9DC33 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20aQ9DC33 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20aQ9DC33 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.99■□□□□ 0.95
Hmg20aQ9DC33 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20aQ9DC33 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20aQ9DC33 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmg20aQ9DC33 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20aQ9DC33 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20aQ9DC33 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20aQ9DC33 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20aQ9DC33 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20aQ9DC33 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hmg20aQ9DC33 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20aQ9DC33 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20aQ9DC33 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hmg20aQ9DC33 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20aQ9DC33 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20aQ9DC33 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20aQ9DC33 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.96■□□□□ 0.95
Hmg20aQ9DC33 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmg20aQ9DC33 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmg20aQ9DC33 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmg20aQ9DC33 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hmg20aQ9DC33 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms