Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rtl8cQ9D6I0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Rtl8cQ9D6I0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rtl8cQ9D6I0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rtl8cQ9D6I0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.73■□□□□ 0.91
Rtl8cQ9D6I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rtl8cQ9D6I0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.72■□□□□ 0.91
Rtl8cQ9D6I0 Gm6821-201ENSMUST00000107540 542 ntBASIC20.72■□□□□ 0.91
Rtl8cQ9D6I0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl8cQ9D6I0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl8cQ9D6I0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Rtl8cQ9D6I0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtl8cQ9D6I0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Rtl8cQ9D6I0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.7■□□□□ 0.9
Rtl8cQ9D6I0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtl8cQ9D6I0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtl8cQ9D6I0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtl8cQ9D6I0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtl8cQ9D6I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtl8cQ9D6I0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl8cQ9D6I0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl8cQ9D6I0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rtl8cQ9D6I0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl8cQ9D6I0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl8cQ9D6I0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl8cQ9D6I0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtl8cQ9D6I0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl8cQ9D6I0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Gm8503-201ENSMUST00000118131 455 ntBASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rtl8cQ9D6I0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rtl8cQ9D6I0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtl8cQ9D6I0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rtl8cQ9D6I0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Rtl8cQ9D6I0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl8cQ9D6I0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.62■□□□□ 0.89
Rtl8cQ9D6I0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtl8cQ9D6I0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl8cQ9D6I0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Rtl8cQ9D6I0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl8cQ9D6I0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl8cQ9D6I0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl8cQ9D6I0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl8cQ9D6I0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rtl8cQ9D6I0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl8cQ9D6I0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl8cQ9D6I0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl8cQ9D6I0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.58■□□□□ 0.89
Rtl8cQ9D6I0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.58■□□□□ 0.89
Rtl8cQ9D6I0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rtl8cQ9D6I0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl8cQ9D6I0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl8cQ9D6I0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rtl8cQ9D6I0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl8cQ9D6I0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl8cQ9D6I0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl8cQ9D6I0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.56■□□□□ 0.88
Rtl8cQ9D6I0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl8cQ9D6I0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl8cQ9D6I0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl8cQ9D6I0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl8cQ9D6I0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl8cQ9D6I0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl8cQ9D6I0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl8cQ9D6I0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.54■□□□□ 0.88
Rtl8cQ9D6I0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.54■□□□□ 0.88
Rtl8cQ9D6I0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Rtl8cQ9D6I0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl8cQ9D6I0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.52■□□□□ 0.88
Rtl8cQ9D6I0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl8cQ9D6I0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtl8cQ9D6I0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rtl8cQ9D6I0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl8cQ9D6I0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rtl8cQ9D6I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rtl8cQ9D6I0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.5■□□□□ 0.87
Rtl8cQ9D6I0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl8cQ9D6I0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms